RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 EGFP01133 1207 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 SP9P0CG40 484 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 PNMA6AP0CW24 399 aaPredicted RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 ADH5P11766 374 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 UCHL3P15374 230 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 ZNF18P17022 549 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 CDK11BP21127 795 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 DRD1P21728 446 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 CLCN1P35523 988 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 ACADSBP45954 432 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 RPL34P49207 117 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 COPB1P53618 953 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 CSTF1Q05048 431 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 PTK2Q05397 1052 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 RAPGEF1Q13905 1077 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 DRAP1Q14919 205 aaPredicted RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 LY6G5CQ5SRR4 150 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 FKBP15Q5T1M5 1219 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 BTBD8Q5XKL5 378 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 Q6ZS52 159 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 SCUBE3Q8IX30 993 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 FAM71AQ8IYT1 594 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 SYNPOQ8N3V7 929 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 SPEM1Q8N4L4 309 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 ANKRD20A12PQ8NF67 263 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 CLEC4CQ8WTT0 213 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 RNF139Q8WU17 664 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 IRGQQ8WZA9 623 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 EDEM1Q92611 657 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 CD101Q93033 1021 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 BPIFA3Q9BQP9 254 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 LSM14BQ9BX40 385 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 NAA15Q9BXJ9 866 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 HSD3B7Q9H2F3 369 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 PLCB1Q9NQ66 1216 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 SPHK2Q9NRA0 654 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 ST7Q9NRC1 585 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 ABCC13Q9NSE7 274 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 OLA1Q9NTK5 396 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 MARCH2Q9P0N8 246 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 LIMA1Q9UHB6 759 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 CYTH4Q9UIA0 394 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 RASAL2Q9UJF2 1139 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 LSM7Q9UK45 103 aaKnown RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 FBXO4Q9UKT5 387 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 STRIP2Q9ULQ0 834 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 FHOD1Q9Y613 1164 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 CFAP54Q96N23 3096 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 ZFHX2Q9C0A1 2572 aaPredicted RBP9.63□□□□□ -0.87
DNMT1-223ENST00000591239 SLC12A8A0AV02 714 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 LTFP02788 710 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 KLKB1P03952 638 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 HMBSP08397 361 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 PTMSP20962 102 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 KRT9P35527 623 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 OPRD1P41143 372 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 EIF2DP41214 584 aaKnown RBP9.62□□□□□ -0.87
DNMT1-223ENST00000591239 NBL1P41271 181 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 CXCL12P48061 93 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 KLK7P49862 253 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 CCR3P51677 355 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 BPIFB4P59827 614 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 PPP2R5DQ14738 602 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 ZNF528Q3MIS6 628 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 FBXO43Q4G163 708 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 Q6ZNB5 142 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 SLC47A2Q86VL8 602 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 TMEM25Q86YD3 366 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 STK33Q9BYT3 514 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 DCLK3Q9C098 648 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 MIS12Q9H081 205 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 LHX5Q9H2C1 402 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 PRMT8Q9NR22 394 aaPredicted RBP9.62□□□□□ -0.87
DNMT1-223ENST00000591239 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
DNMT1-223ENST00000591239 PIEZO1Q92508 2521 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 MYOFQ9NZM1 2061 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 SYCE3A1L190 88 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 SMTNL1A8MU46 457 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 LGALS16A8MUM7 142 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 E5RJQ4 531 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 F8VZ95 297 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 HOXC11O43248 304 aaPredicted RBP9.61□□□□□ -0.87
DNMT1-223ENST00000591239 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
DNMT1-223ENST00000591239 RNF40O75150 1001 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 ATP1A3P13637 1013 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 CORO1AP31146 461 aaKnown RBP9.61□□□□□ -0.87
DNMT1-223ENST00000591239 SLC6A11P48066 632 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 ZNF165P49910 485 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 SATB1Q01826 763 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 UBXN1Q04323 297 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 GAD2Q05329 585 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 MESP2Q0VG99 397 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 PDCLQ13371 301 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 SYCP1Q15431 976 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 ANO4Q32M45 955 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 PKN3Q6P5Z2 889 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 TSSK4Q6SA08 328 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 TPGS1Q6ZTW0 290 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms