RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 TMEM30AQ9NV96 361 aa20.27■□□□□ 0.84
SPHK1-207ENST00000590959 CHD9Q3L8U1 2897 aa20.27■□□□□ 0.84
SPHK1-207ENST00000590959 LRRD1A4D1F6 860 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 E7EVH7 732 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 PI4K2BG5E9Z4 385 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 PRPSAP2O60256 369 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 PPFIA2O75334 1257 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 TRUB2O95900 331 aaKnown RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 FNTAP49354 379 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 BCAR1P56945 870 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 HTRA4P83105 476 aaPredicted RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 SMTNL2Q2TAL5 461 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 RAB41Q5JT25 222 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 KCNT1Q5JUK3 1230 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 VARS2Q5ST30 1063 aaKnown RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 FAM172AQ8WUF8 416 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 UBLCP1Q8WVY7 318 aaPredicted RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 RAPGEF5Q92565 580 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 TACO1Q9BSH4 297 aaKnown RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 HEMGNQ9BXL5 484 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 RHOBTB2Q9BYZ6 727 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 GPR62Q9BZJ7 368 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 ZCWPW1Q9H0M4 648 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 CWH43Q9H720 699 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 NGRNQ9NPE2 291 aaKnown RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 LCHNA4D1U4 455 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 PTPN7P35236 360 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 NDUFV1P49821 464 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 YWHAZP63104 245 aaKnown RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 KLF1Q13351 362 aaPredicted RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 TFDP3Q5H9I0 405 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 C6orf89Q6UWU4 347 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 MFSD7Q6UXD7 560 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 SPOCD1Q6ZMY3 1216 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 CEP57Q86XR8 500 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 C12orf50Q8NA57 414 aaPredicted RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 ACSF2Q96CM8 615 aaPredicted RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 SLC9A7Q96T83 725 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 ZBED2Q9BTP6 218 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 DDX23Q9BUQ8 820 aaKnown RBP20.26■□□□□ 0.83
SPHK1-207ENST00000590959 PNPLA8Q9NP80 782 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 CAPN7Q9Y6W3 813 aa20.26■□□□□ 0.83
SPHK1-207ENST00000590959 NT5C1B-RDH14C9J2C7 533 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 HHLA1C9JL84 531 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 MYOGP15173 224 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 FGFR3P22607 806 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 HNRNPH1P31943 449 aaKnown RBP20.25■□□□□ 0.83
SPHK1-207ENST00000590959 MATKP42679 507 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 DR1Q01658 176 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 SLC39A12Q504Y0 691 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 ZNF280DQ6N043 979 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 FUT10Q6P4F1 479 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 PHOSPHO2Q8TCD6 241 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 FMO2Q99518 471 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 HERPUD2Q9BSE4 406 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 ULBP1Q9BZM6 244 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 LRRC19Q9H756 370 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 HOMER3Q9NSC5 361 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 PCYOX1Q9UHG3 505 aa20.25■□□□□ 0.83
SPHK1-207ENST00000590959 TTI1O43156 1089 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 DAB1O75553 588 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 TJP3O95049 919 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 NUDT17P0C025 328 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 ALDH7A1P49419 539 aaKnown RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 ACTN3Q08043 901 aaPredicted RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 MRPL58Q14197 206 aaKnown RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 BTG3Q14201 252 aaPredicted RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 NFE2Q16621 373 aaPredicted RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 CTXN3Q4LDR2 81 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 CCDC137Q6PK04 289 aaKnown RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 GPRIN1Q7Z2K8 1008 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 ANKS1BQ7Z6G8 1248 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 CMASQ8NFW8 434 aaPredicted RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 NDRG1Q92597 394 aaKnown RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 C11orf84Q9BUA3 381 aaPredicted RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 MRPL42Q9Y6G3 142 aaKnown RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 OR6C75A6NL08 312 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 DAPK3O43293 454 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 OR4Q2P0C623 313 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 KDELR1P24390 212 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 CDKN2BP42772 138 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 DAOAP59103 153 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 TRADDQ15628 312 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 BOLA3Q53S33 107 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 SCYL2Q6P3W7 929 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 CCDC121Q6ZUS5 278 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 TMEM173Q86WV6 379 aaPredicted RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 DEFB106AQ8N104 65 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 KCTD6Q8NC69 237 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 CENPIQ92674 756 aaPredicted RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 PEBP4Q96S96 227 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 TBCBQ99426 244 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 TXLNGYQ9BZA5 131 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 MTIF3Q9H2K0 278 aaKnown RBP20.24■□□□□ 0.83
SPHK1-207ENST00000590959 POPDC2Q9HBU9 364 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 EFR3BQ9Y2G0 817 aa20.24■□□□□ 0.83
SPHK1-207ENST00000590959 hCG_1818297A0A087WSY0 165 aa20.23■□□□□ 0.83
SPHK1-207ENST00000590959 C3orf70A6NLC5 250 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms