RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, human

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-219	ENST00000590953	PLEK	P08567	350 aa	Predicted RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	EIF4A3	P38919	411 aa	Known RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	MRE11	P49959	708 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	KPNA1	P52294	538 aa	Predicted RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	EFEMP1	Q12805	493 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	PTP4A2	Q12974	167 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	USP4	Q13107	963 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	MTF1	Q14872	753 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	ZNF77	Q15935	545 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	ARHGAP29	Q52LW3	1261 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	C2CD6	Q53TS8	623 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	MSANTD2	Q6P1R3	559 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	VIT	Q6UXI7	678 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	MON1B	Q7L1V2	547 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	ARC	Q7LC44	396 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	MIB1	Q86YT6	1006 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	MCOLN2	Q8IZK6	566 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	SLC44A3	Q8N4M1	653 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	SPC24	Q8NBT2	197 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	OLIG1	Q8TAK6	271 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	RSAD2	Q8WXG1	361 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	ANP32B	Q92688	251 aa	Known RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	NECAB3	Q96P71	396 aa	Predicted RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	SLC2A13	Q96QE2	648 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	TRMT61B	Q9BVS5	477 aa	Known RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	KLF16	Q9BXK1	252 aa	Predicted RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	TMEM51	Q9NW97	253 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	SMPD4	Q9NXE4	827 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	RRN3	Q9NYV6	651 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	TAS2R14	Q9NYV8	317 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	LSM7	Q9UK45	103 aa	Known RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	NUDT5	Q9UKK9	219 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	SORCS3	Q9UPU3	1222 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	CCL26	Q9Y258	94 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	SH3BP1	Q9Y3L3	701 aa		10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953	HBS1L	Q9Y450	684 aa	Known RBP	10.37	□□□□□ -0.75
RANBP3-219	ENST00000590953		A0A087X0T9	212 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	SLC12A8	A0AV02	714 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	E2F8	A0AVK6	867 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	FAM170A	A1A519	330 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	SLC9A3R1	O14745	358 aa	Predicted RBP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	ZNF263	O14978	683 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	MDM4	O15151	490 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	GRAP2	O75791	330 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	FYN	P06241	537 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	FAM228B	P0C875	321 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	MYBL1	P10243	752 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	KRT3	P12035	628 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	NOS2	P35228	1153 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	MATK	P42679	507 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	GSDMD	P57764	484 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	RNASE9	P60153	205 aa	Known RBP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	PFKP	Q01813	784 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	FCHO2	Q0JRZ9	810 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	NNT	Q13423	1086 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	TAF5	Q15542	800 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	SLC18A3	Q16572	532 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	DCAF6	Q58WW2	860 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	CCDC122	Q5T0U0	273 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	DNAJC24	Q6P3W2	148 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	ALKBH5	Q6P6C2	394 aa	Known RBP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	UBALD2	Q8IYN6	164 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	DEFB106A	Q8N104	65 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	C3orf20	Q8ND61	904 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	TTC16	Q8NEE8	873 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	RSPRY1	Q96DX4	576 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	PIWIL1	Q96J94	861 aa	Known RBP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	ZFR	Q96KR1	1074 aa	Known RBP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	SERPINB11	Q96P15	392 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	CHP1	Q99653	195 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	RPP25	Q9BUL9	199 aa	Known RBP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	SELENOO	Q9BVL4	669 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	PLA2G2F	Q9BZM2	168 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	DCLK3	Q9C098	648 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	ISCU	Q9H1K1	167 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	SMOC2	Q9H3U7	446 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	CD320	Q9NPF0	282 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	GKN1	Q9NS71	199 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.36	□□□□□ -0.75	6e-6	■■□□□ 12.6
RANBP3-219	ENST00000590953	CFAP97	Q9P2B7	532 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	STAP1	Q9ULZ2	295 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	DUSP12	Q9UNI6	340 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	NAALADL1	Q9UQQ1	740 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	ZNF510	Q9Y2H8	683 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	NCOR1	O75376	2440 aa		10.36	□□□□□ -0.75
RANBP3-219	ENST00000590953	BDP1	A6H8Y1	2624 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	ANKRD62	A6NC57	917 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	SIGLEC16	A6NMB1	481 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	CHAD	O15335	359 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	IRF1	P10914	325 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	SRF	P11831	508 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	RRM1	P23921	792 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	GDI1	P31150	447 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	GBP1	P32455	592 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	IFNAR2	P48551	515 aa		10.35	□□□□□ -0.75
RANBP3-219	ENST00000590953	HARS2	P49590	506 aa	Known RBP	10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms