RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ADAM32Q8TC27 787 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 CRELD1Q96HD1 420 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 GAREM1Q9H706 876 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 FAM13BQ9NYF5 915 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 NFE2L3Q9Y4A8 694 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 FAM92AA1XBS5 289 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 GFRA2O00451 464 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 CISD3P0C7P0 127 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 ATXN1LP0C7T5 689 aaKnown RBP18.33■□□□□ 0.52
RETREG3-210ENST00000590541 TYRP14679 529 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 ME1P48163 572 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 PGFP49763 221 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 SLC5A3P53794 718 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 FOXD4L5Q5VV16 416 aaPredicted RBP18.33■□□□□ 0.52
RETREG3-210ENST00000590541 DBX2Q6ZNG2 339 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 PAQR9Q6ZVX9 377 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 METTL3Q86U44 580 aaKnown RBP18.33■□□□□ 0.52
RETREG3-210ENST00000590541 SCFD1Q8WVM8 642 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 FOXD4L4Q8WXT5 416 aaPredicted RBP18.33■□□□□ 0.52
RETREG3-210ENST00000590541 DHX58Q96C10 678 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 TOE1Q96GM8 510 aaKnown RBP18.33■□□□□ 0.52
RETREG3-210ENST00000590541 XPO6Q96QU8 1125 aaKnown RBP18.33■□□□□ 0.52
RETREG3-210ENST00000590541 BBS2Q9BXC9 721 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 TM7SF3Q9NS93 570 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 MARK1Q9P0L2 795 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 GMIPQ9P107 970 aa18.33■□□□□ 0.52
RETREG3-210ENST00000590541 USP36Q9P275 1121 aaKnown RBP18.33■□□□□ 0.52
RETREG3-210ENST00000590541 FNDC3AQ9Y2H6 1198 aaKnown RBP18.33■□□□□ 0.52
RETREG3-210ENST00000590541 MEI4A8MW99 385 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 A8MXQ7 604 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 CILPO75339 1184 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 NCAM1P13591 858 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 CYP4F3Q08477 520 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 CAMK2BQ13554 666 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 WDR72Q3MJ13 1102 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 TPGS1Q6ZTW0 290 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 C7orf25Q9BPX7 421 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 GPR174Q9BXC1 333 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 ITM2CQ9NQX7 267 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 RCOR1Q9UKL0 485 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 PCDHA7Q9UN72 937 aa18.32■□□□□ 0.52
RETREG3-210ENST00000590541 A0A087WV48 116 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 TRABD2BA6NFA1 517 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 KCNJ18B7U540 433 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 EIF3DO15371 548 aaKnown RBP eCLIP18.31■□□□□ 0.52
RETREG3-210ENST00000590541 CER1O95813 267 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 MATKP42679 507 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 DGKGP49619 791 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 TNNC1P63316 161 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 ASIC1P78348 528 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 HLA-BQ31612 363 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 FUT11Q495W5 492 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 RESP18Q5W5W9 173 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 FAM35AQ86V20 835 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 CADM4Q8NFZ8 388 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 KLF16Q9BXK1 252 aaPredicted RBP18.31■□□□□ 0.52
RETREG3-210ENST00000590541 MKRN2Q9H000 416 aaKnown RBP18.31■□□□□ 0.52
RETREG3-210ENST00000590541 MIR1-1HGQ9H1L0 117 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 PRDM16Q9HAZ2 1276 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 HSPBP1Q9NZL4 362 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 WDR35Q9P2L0 1181 aa18.31■□□□□ 0.52
RETREG3-210ENST00000590541 URB1O60287 2271 aaKnown RBP18.3■□□□□ 0.52
RETREG3-210ENST00000590541 POLR2DO15514 142 aaKnown RBP18.3■□□□□ 0.52
RETREG3-210ENST00000590541 TLR5O60602 858 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 TBX18O95935 607 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
RETREG3-210ENST00000590541 DCAF12L1Q5VU92 463 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 SCUBE3Q8IX30 993 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 C1orf216Q8TAB5 229 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 RHBDD1Q8TEB9 315 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 P2RY11Q96G91 374 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 NACA2Q9H009 215 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 KIAA1586Q9HCI6 787 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 DMAP1Q9NPF5 467 aaPredicted RBP18.3■□□□□ 0.52
RETREG3-210ENST00000590541 COMMD8Q9NX08 183 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 ATP6V1DQ9Y5K8 247 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 STON1Q9Y6Q2 735 aa18.3■□□□□ 0.52
RETREG3-210ENST00000590541 UBE4BO95155 1302 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 BPTFQ12830 3046 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 PVALEFA0A1B0GWK0 134 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 METTL12A8MUP2 240 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 BCAT2O15382 392 aaPredicted RBP18.29■□□□□ 0.52
RETREG3-210ENST00000590541 FLRT2O43155 660 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
RETREG3-210ENST00000590541 PRB1P04280 392 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 DLATP10515 647 aaKnown RBP18.29■□□□□ 0.52
RETREG3-210ENST00000590541 TNNI1P19237 187 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 HOXD13P35453 343 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 DNM1Q05193 864 aaKnown RBP18.29■□□□□ 0.52
RETREG3-210ENST00000590541 FOXD4L6Q3SYB3 417 aaPredicted RBP18.29■□□□□ 0.52
RETREG3-210ENST00000590541 IL27RAQ6UWB1 636 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 FOXD4L3Q6VB84 417 aaPredicted RBP18.29■□□□□ 0.52
RETREG3-210ENST00000590541 UNC13DQ70J99 1090 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 RDH13Q8NBN7 331 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 ZMIZ2Q8NF64 920 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 CGRRF1Q99675 332 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 CDC6Q99741 560 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 XYLT2Q9H1B5 865 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 NXF1Q9UBU9 619 aaKnown RBP18.29■□□□□ 0.52
RETREG3-210ENST00000590541 FBXO10Q9UK96 956 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms