RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 OSER1Q9NX31 292 aa17.71■□□□□ 0.43
GCDH-212ENST00000590530 PLXNA4Q9HCM2 1894 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 ZSCAN5CA6NGD5 496 aaPredicted RBP17.7■□□□□ 0.42
GCDH-212ENST00000590530 GRM6O15303 877 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 TTI1O43156 1089 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 HSF2BPO75031 334 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 CXCL14O95715 111 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 IRS1P35568 1242 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 HDAC4P56524 1084 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 SMC1AQ14683 1233 aaKnown RBP17.7■□□□□ 0.42
GCDH-212ENST00000590530 EFHC1Q5JVL4 640 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 EMBQ6PCB8 327 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 TMC7Q7Z402 723 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 ZNF461Q8TAF7 563 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 FAM172AQ8WUF8 416 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 POF1BQ8WVV4 589 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 CASKIN2Q8WXE0 1202 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 SLCO2A1Q92959 643 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 SLC2A13Q96QE2 648 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 TCF25Q9BQ70 676 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 RAB17Q9H0T7 212 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 NGRNQ9NPE2 291 aaKnown RBP17.7■□□□□ 0.42
GCDH-212ENST00000590530 HOMER3Q9NSC5 361 aa17.7■□□□□ 0.42
GCDH-212ENST00000590530 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.7■□□□□ 0.42
GCDH-212ENST00000590530 PI4K2BG5E9Z4 385 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 TRIM66O15016 1216 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 FBXO21O94952 628 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 DESP17661 470 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 SDC4P31431 198 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 COILP38432 576 aaPredicted RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 MATKP42679 507 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 PTPN9P43378 593 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 RAB33AQ14088 237 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 BSPRYQ5W0U4 402 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 TTC27Q6P3X3 843 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 SPOCD1Q6ZMY3 1216 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 HDXQ7Z353 690 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 NUP93Q8N1F7 819 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 OXCT2Q9BYC2 517 aaPredicted RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 CYP4F11Q9HBI6 524 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 AFF4Q9UHB7 1163 aaKnown RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 RASAL2Q9UJF2 1139 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 NUDT5Q9UKK9 219 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 EFR3BQ9Y2G0 817 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 TNRC18O15417 2968 aaPredicted RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 SYNJ2BP-COX16A0A087WUM0 186 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 MAP2K7O14733 419 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 DAB1O75553 588 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 LTFP02788 710 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 ATF2P15336 505 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 PTGIRP43119 386 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 NNTQ13423 1086 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 TAZQ16635 292 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 PLPP4Q5VZY2 271 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 CCDC137Q6PK04 289 aaKnown RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 JAMLQ86YT9 394 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 GSPT2Q8IYD1 628 aaKnown RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 RAPGEF5Q92565 580 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 RNF25Q96BH1 459 aaPredicted RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 POPDC2Q9HBU9 364 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 RXFP1Q9HBX9 757 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 TMPRSS4Q9NRS4 437 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 COX16Q9P0S2 106 aa17.69■□□□□ 0.42
GCDH-212ENST00000590530 UTP11Q9Y3A2 253 aaKnown RBP17.69■□□□□ 0.42
GCDH-212ENST00000590530 PATJQ8NI35 1801 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 hCG_1818297A0A087WSY0 165 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 A0A1W2PQH9 124 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 ESYT3A0FGR9 886 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 TRUB2O95900 331 aaKnown RBP17.68■□□□□ 0.42
GCDH-212ENST00000590530 CARSP49589 748 aaKnown RBP17.68■□□□□ 0.42
GCDH-212ENST00000590530 ODF2Q5BJF6 829 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 TFDP3Q5H9I0 405 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 MFSD7Q6UXD7 560 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 CENPIQ92674 756 aaPredicted RBP17.68■□□□□ 0.42
GCDH-212ENST00000590530 CAVIN3Q969G5 261 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 PBX4Q9BYU1 374 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 GPATCH2LQ9NWQ4 482 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 FAM53CQ9NYF3 392 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 GMIPQ9P107 970 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 USP18Q9UMW8 372 aa17.68■□□□□ 0.42
GCDH-212ENST00000590530 LRRD1A4D1F6 860 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 C3orf70A6NLC5 250 aaPredicted RBP17.67■□□□□ 0.42
GCDH-212ENST00000590530 SASH3O75995 380 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 TJP3O95049 919 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 NCAM1P13591 858 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 CDKN2BP42772 138 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 SULT1E1P49888 294 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 SMARCB1Q12824 385 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 ZFYVE27Q5T4F4 411 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 SCYL2Q6P3W7 929 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 DENND5BQ6ZUT9 1274 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 CMASQ8NFW8 434 aaPredicted RBP17.67■□□□□ 0.42
GCDH-212ENST00000590530 C2orf15Q8WU43 125 aaKnown RBP17.67■□□□□ 0.42
GCDH-212ENST00000590530 NT5C3BQ969T7 300 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 KLHL5Q96PQ7 755 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 NPY6RQ99463 290 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 HINFPQ9BQA5 517 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 DCLK3Q9C098 648 aa17.67■□□□□ 0.42
GCDH-212ENST00000590530 FAM114A2Q9NRY5 505 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms