RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 A0A1B0GTW7 788 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 CASQ2O14958 399 aaPredicted RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 GSRP00390 522 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 EIF2AK2P19525 551 aaKnown RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 SLC5A2P31639 672 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 EMP3P54852 163 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 CLDN10P78369 228 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 MYBPC1Q00872 1141 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 OGFRL1Q5TC84 451 aaPredicted RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 MARVELD2Q8N4S9 558 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 NTPCRQ9BSD7 190 aaKnown RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 POPDC2Q9HBU9 364 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 TELO2Q9Y4R8 837 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 H3BSA7 217 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 MYCLP12524 364 aaPredicted RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 CNGA3Q16281 694 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 TEDDM1Q5T9Z0 273 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 RTKN2Q8IZC4 609 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 CCDC33Q8N5R6 958 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 TFAP2BQ92481 460 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 JADE3Q92613 823 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 CSRNP1Q96S65 589 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 HOMER2Q9NSB8 354 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 STAM2O75886 525 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 CRTAMO95727 393 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 CST3P01034 146 aaPredicted RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 HNRNPCP07910 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
MBD1-222ENST00000590208 L1CAMP32004 1257 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 MAGEA8P43361 318 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 SMAD1Q15797 465 aaKnown RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 FBXW8Q8N3Y1 598 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 SAMD3Q8N6K7 520 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 PRPF31Q8WWY3 499 aaKnown RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 CATSPER2Q96P56 530 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 IFT122Q9HBG6 1241 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 SERPINA10Q9UK55 444 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 AGO2Q9UKV8 859 aaKnown RBP16.32■□□□□ 0.2
MBD1-222ENST00000590208 CNTN6Q9UQ52 1028 aa16.32■□□□□ 0.2
MBD1-222ENST00000590208 APOC4-APOC2K7ER74 178 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 KLHL2O95198 593 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 APOC2P02655 101 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 ARRB2P32121 409 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 GMPRP36959 345 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 MAP7D3Q8IWC1 876 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 SP8Q8IXZ3 490 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 PQLC1Q8N2U9 271 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 NIPA2Q8N8Q9 360 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 TMEM35BQ8NCS4 154 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 MIPOL1Q8TD10 442 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 MRPL1Q9BYD6 325 aaKnown RBP16.31■□□□□ 0.2
MBD1-222ENST00000590208 RBAKQ9NYW8 714 aaPredicted RBP16.31■□□□□ 0.2
MBD1-222ENST00000590208 SLC17A6Q9P2U8 582 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 ITGA11Q9UKX5 1188 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 SORCS3Q9UPU3 1222 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 UBIAD1Q9Y5Z9 338 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 AP4B1Q9Y6B7 739 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 AK5Q9Y6K8 562 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
MBD1-222ENST00000590208 DENRO43583 198 aaKnown RBP16.31■□□□□ 0.2
MBD1-222ENST00000590208 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
MBD1-222ENST00000590208 CRHR1P34998 444 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 SLC1A6P48664 564 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 IDH3AP50213 366 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 ROR1Q01973 937 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 CDK18Q07002 472 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 CYLC2Q14093 348 aaPredicted RBP16.31■□□□□ 0.2
MBD1-222ENST00000590208 LGSNQ5TDP6 509 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 MBLAC2Q68D91 279 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 CAND1Q86VP6 1230 aaKnown RBP16.31■□□□□ 0.2
MBD1-222ENST00000590208 MAN1C1Q9NR34 630 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 CIDEBQ9UHD4 219 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 BLOC1S6Q9UL45 172 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
MBD1-222ENST00000590208 DCXO43602 365 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 SPAG6O75602 509 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 APRTP07741 180 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 SRGAP2CP0DJJ0 459 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 SRGAP2BP0DMP2 458 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 KRT3P12035 628 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 ZNF132P52740 706 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 SP4Q02446 784 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 PPP6R3Q5H9R7 873 aaPredicted RBP16.3■□□□□ 0.2
MBD1-222ENST00000590208 C6orf52Q5T4I8 152 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 PDPK2PQ6A1A2 396 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 UNC5BQ8IZJ1 945 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 HSPBAP1Q96EW2 488 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 GLIS2Q9BZE0 524 aaPredicted RBP16.3■□□□□ 0.2
MBD1-222ENST00000590208 LIN28AQ9H9Z2 209 aaKnown RBP16.3■□□□□ 0.2
MBD1-222ENST00000590208 PNPLA8Q9NP80 782 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 ZNF180Q9UJW8 692 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 EFR3BQ9Y2G0 817 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 PCDHGA4Q9Y5G9 962 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 H7C0C1 242 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 PEX1O43933 1283 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 TRPA1O75762 1119 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 KRT38O76015 456 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 KRT7P08729 469 aa16.3■□□□□ 0.2
MBD1-222ENST00000590208 FGF3P11487 239 aaPredicted RBP16.3■□□□□ 0.2
MBD1-222ENST00000590208 ATP5OP48047 213 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms