RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 GFRA1P56159 465 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 IRX4P78413 519 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 CYP4F8P98187 520 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 PKP1Q13835 747 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 PON2Q15165 354 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 ZNF648Q5T619 568 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-209ENST00000589941 PCSK4Q6UW60 755 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 MARCH9Q86YJ5 346 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 HASPINQ8TF76 798 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 RSPH1Q8WYR4 309 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 ANP32BQ92688 251 aaKnown RBP8.54□□□□□ -1.04
SMAD4-209ENST00000589941 MXRA8Q9BRK3 442 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 PAAF1Q9BRP4 392 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 FDXACB1Q9BRP7 624 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-209ENST00000589941 CCDC113Q9H0I3 377 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 RNF41Q9H4P4 317 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-209ENST00000589941 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMAD4-209ENST00000589941 GDE1Q9NZC3 331 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 INVSQ9Y283 1065 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 TTC41PQ6P2S7 1318 aa8.54□□□□□ -1.04
SMAD4-209ENST00000589941 ZNF638Q14966 1978 aaKnown RBP8.53□□□□□ -1.04
SMAD4-209ENST00000589941 FLNCQ14315 2725 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 CCDC194A0A1B0GVG4 234 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 TMEM150BA6NC51 233 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 SPECC1L-ADORA2AF8WAN1 911 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 AGRPO00253 132 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 AKAP3O75969 853 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 C1RP00736 705 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 SCG5P05408 212 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 POU2F2P09086 479 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 PSMC3P17980 439 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 BCKDHBP21953 392 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 KIF5BP33176 963 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 RAB27AP51159 221 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 HSP90AA2PQ14568 343 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-209ENST00000589941 PSMD5Q16401 504 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 UGCGQ16739 394 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 INF2Q27J81 1249 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 USP41Q3LFD5 358 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 GLIPR1L2Q4G1C9 344 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 DENND5AQ6IQ26 1287 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 CAVIN1Q6NZI2 390 aaKnown RBP8.53□□□□□ -1.04
SMAD4-209ENST00000589941 IRF2BP1Q8IU81 584 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 PNPLA1Q8N8W4 532 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 TMEM145Q8NBT3 493 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 PIP4K2CQ8TBX8 421 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 TMX3Q96JJ7 454 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 GAD1Q99259 594 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 CLMPQ9H6B4 373 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 TRPV5Q9NQA5 729 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 ARHGEF4Q9NR80 690 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 HELLSQ9NRZ9 838 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 SNTG2Q9NY99 539 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 FBLN5Q9UBX5 448 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 PCDHA6Q9UN73 950 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 PCDHA8Q9Y5H6 950 aa8.53□□□□□ -1.04
SMAD4-209ENST00000589941 ATXN2Q99700 1313 aaKnown RBP8.53□□□□□ -1.04
SMAD4-209ENST00000589941 TP53BP1Q12888 1972 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-209ENST00000589941 hCG_1642624A0A1W2PR95 340 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 C7orf72A4D263 438 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 ARL5CA6NH57 179 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 MOSPD3O75425 235 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 KRT38O76015 456 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 GJA1P17302 382 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 SFPQP23246 707 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMAD4-209ENST00000589941 TACR1P25103 407 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 CHMLP26374 656 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 CCDC178Q5BJE1 867 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 CCNI2Q6ZMN8 369 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-209ENST00000589941 CATSPER4Q7RTX7 472 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 MRPL10Q7Z7H8 261 aaKnown RBP8.52□□□□□ -1.05
SMAD4-209ENST00000589941 CCDC103Q8IW40 242 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 POU5F2Q8N7G0 328 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 OR2I1PQ8NGU4 316 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 LNX1Q8TBB1 728 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-209ENST00000589941 C1orf159Q96HA4 380 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 SGSM3Q96HU1 749 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 ZFYVE19Q96K21 471 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 SH2D3AQ9BRG2 576 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 UBAC1Q9BSL1 405 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 PDCL3Q9H2J4 239 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 EPB41L4BQ9H329 900 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 ZFP14Q9HCL3 533 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 TNFRSF12AQ9NP84 129 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 AGPAT5Q9NUQ2 364 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 PFDN2Q9UHV9 154 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 MBD1Q9UIS9 605 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-209ENST00000589941 ADAM28Q9UKQ2 775 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 HES2Q9Y543 173 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 CNTNAP2Q9UHC6 1331 aa8.52□□□□□ -1.05
SMAD4-209ENST00000589941 CCDC163A0A0D9SF12 145 aa8.51□□□□□ -1.05
SMAD4-209ENST00000589941 A0A1W2PQ27 194 aa8.51□□□□□ -1.05
SMAD4-209ENST00000589941 A0A1W2PQ64 194 aa8.51□□□□□ -1.05
SMAD4-209ENST00000589941 A0A1W2PQC6 194 aa8.51□□□□□ -1.05
SMAD4-209ENST00000589941 A0A1W2PQD8 194 aa8.51□□□□□ -1.05
SMAD4-209ENST00000589941 MYBPHLA2RUH7 354 aa8.51□□□□□ -1.05
SMAD4-209ENST00000589941 PLEKHA8P1O95397 391 aa8.51□□□□□ -1.05
SMAD4-209ENST00000589941 IGFBP6P24592 240 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms