RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TEX35Q5T0J7 233 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 MFSD7Q6UXD7 560 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 UBXN4Q92575 508 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 SAMD11Q96NU1 681 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 AP1M1Q9BXS5 423 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 EMILIN2Q9BXX0 1053 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 OSBPL8Q9BZF1 889 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.18■□□□□ 0.5
CXXC1-212ENST00000589940 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.18■□□□□ 0.5
CXXC1-212ENST00000589940 V9GYY5 206 aaPredicted RBP18.18■□□□□ 0.5
CXXC1-212ENST00000589940 C3orf70A6NLC5 250 aaPredicted RBP18.17■□□□□ 0.5
CXXC1-212ENST00000589940 FSCN2O14926 492 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 RALAP11233 206 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 PTPN7P35236 360 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 PSEN1P49768 467 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 TAF10Q12962 218 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 NME3Q13232 169 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 SPOCD1Q6ZMY3 1216 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 ADAT2Q7Z6V5 191 aaKnown RBP18.17■□□□□ 0.5
CXXC1-212ENST00000589940 FAM131BQ86XD5 332 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 MRPL43Q8N983 215 aaKnown RBP18.17■□□□□ 0.5
CXXC1-212ENST00000589940 KCTD6Q8NC69 237 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 ADAM32Q8TC27 787 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 DQX1Q8TE96 717 aaKnown RBP18.17■□□□□ 0.5
CXXC1-212ENST00000589940 TGS1Q96RS0 853 aaKnown RBP18.17■□□□□ 0.5
CXXC1-212ENST00000589940 FAM204AQ9H8W3 233 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 PIGVQ9NUD9 493 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 DDIT4Q9NX09 232 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 LAMA3Q16787 3333 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 MYO16Q9Y6X6 1858 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 SYNJ2BP-COX16A0A087WUM0 186 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 GOLGA6L10A0A0M3HER8 536 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 C2orf71A6NGG8 1288 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 TGM5O43548 720 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 F9P00740 461 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 KDELR1P24390 212 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 LLGL1Q15334 1064 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 PPP2R5EQ16537 467 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 TFDP3Q5H9I0 405 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 ERMARDQ5T6L9 678 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 PLPP4Q5VZY2 271 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 ANKS1BQ7Z6G8 1248 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 TAC4Q86UU9 113 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 MMGT1Q8N4V1 131 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 KLHL5Q96PQ7 755 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 SNRNP25Q9BV90 132 aaKnown RBP18.17■□□□□ 0.5
CXXC1-212ENST00000589940 TLR8Q9NR97 1041 aaKnown RBP18.17■□□□□ 0.5
CXXC1-212ENST00000589940 OSER1Q9NX31 292 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 COX16Q9P0S2 106 aa18.17■□□□□ 0.5
CXXC1-212ENST00000589940 CCDC188H7C350 402 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 CSH1P0DML2 217 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 CSH2P0DML3 217 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 CDKN2BP42772 138 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 ERCC6LQ2NKX8 1250 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 CCDC185Q8N715 623 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 RNF139Q8WU17 664 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 SMOC2Q9H3U7 446 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 WDR6Q9NNW5 1121 aaKnown RBP18.16■□□□□ 0.5
CXXC1-212ENST00000589940 CLIC5Q9NZA1 410 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 MAGED2Q9UNF1 606 aaPredicted RBP18.16■□□□□ 0.5
CXXC1-212ENST00000589940 YBX2Q9Y2T7 364 aaKnown RBP18.16■□□□□ 0.5
CXXC1-212ENST00000589940 INSL5Q9Y5Q6 135 aa18.16■□□□□ 0.5
CXXC1-212ENST00000589940 TCRBV7S2A1N4TA0A589 114 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 HIDE1A8MVS5 230 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 IGLV3-25P01717 112 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 ARSEP51690 589 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 ERVK-21P61565 698 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 KLF1Q13351 362 aaPredicted RBP18.15■□□□□ 0.5
CXXC1-212ENST00000589940 VEPH1Q14D04 833 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 TAZQ16635 292 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 MAIP1Q8WWC4 291 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 HERPUD2Q9BSE4 406 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 HEMGNQ9BXL5 484 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 NR2E1Q9Y466 385 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 GREB1Q4ZG55 1949 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 hCG_1818297A0A087WSY0 165 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 GRM6O15303 877 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 KLRC2P26717 231 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 GBP1P32455 592 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 CDH6P55285 790 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 TWF1Q12792 350 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 PDK2Q15119 407 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 LILRA6Q6PI73 481 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 SND1Q7KZF4 910 aaKnown RBP eCLIP18.15■□□□□ 0.5
CXXC1-212ENST00000589940 PSTKQ8IV42 348 aaKnown RBP18.15■□□□□ 0.5
CXXC1-212ENST00000589940 MAP7D3Q8IWC1 876 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 ZDHHC14Q8IZN3 488 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 GPATCH2LQ9NWQ4 482 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.15■□□□□ 0.5
CXXC1-212ENST00000589940 AP4E1Q9UPM8 1137 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 EFR3BQ9Y2G0 817 aa18.15■□□□□ 0.5
CXXC1-212ENST00000589940 GBF1Q92538 1859 aa18.14■□□□□ 0.49
CXXC1-212ENST00000589940 CSPG5O95196 566 aa18.14■□□□□ 0.49
CXXC1-212ENST00000589940 CD48P09326 243 aa18.14■□□□□ 0.49
CXXC1-212ENST00000589940 ZDHHC11BP0C7U3 371 aa18.14■□□□□ 0.49
CXXC1-212ENST00000589940 HMGA1P17096 107 aaKnown RBP18.14■□□□□ 0.49
CXXC1-212ENST00000589940 PBX2P40425 430 aa18.14■□□□□ 0.49
CXXC1-212ENST00000589940 AIF1P55008 147 aa18.14■□□□□ 0.49
CXXC1-212ENST00000589940 CAMK1Q14012 370 aa18.14■□□□□ 0.49
CXXC1-212ENST00000589940 KRT81Q14533 505 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms