RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SMYD5	Q6GMV2	418 aa		18.15	■□□□□ 0.5
MBD1-221	ENST00000589867	SLC47A2	Q86VL8	602 aa		18.15	■□□□□ 0.5
MBD1-221	ENST00000589867	AOPEP	Q8N6M6	819 aa		18.15	■□□□□ 0.5
MBD1-221	ENST00000589867	NELL1	Q92832	810 aa		18.15	■□□□□ 0.5
MBD1-221	ENST00000589867	FAM122A	Q96E09	287 aa		18.15	■□□□□ 0.5
MBD1-221	ENST00000589867	P2RY13	Q9BPV8	354 aa		18.15	■□□□□ 0.5
MBD1-221	ENST00000589867	PLCB1	Q9NQ66	1216 aa		18.15	■□□□□ 0.5
MBD1-221	ENST00000589867	SH3BP1	Q9Y3L3	701 aa		18.15	■□□□□ 0.5
MBD1-221	ENST00000589867	SLC9A3R1	O14745	358 aa	Predicted RBP	18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	RALA	P11233	206 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	USP8	P40818	1118 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	SLC6A11	P48066	632 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	DGKK	Q5KSL6	1271 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	TSSK4	Q6SA08	328 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	TMEM25	Q86YD3	366 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	MIB1	Q86YT6	1006 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	ETFBKMT	Q8IXQ9	262 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	ARHGAP18	Q8N392	663 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	PHTF2	Q8N3S3	785 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	EDEM1	Q92611	657 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	ATOH1	Q92858	354 aa	Predicted RBP	18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	OTUB2	Q96DC9	234 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	BPIFA3	Q9BQP9	254 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	NACA2	Q9H009	215 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	POLR3B	Q9NW08	1133 aa	Predicted RBP	18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	TBC1D14	Q9P2M4	693 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	RASAL2	Q9UJF2	1139 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	PCDHGC3	Q9UN70	934 aa		18.14	■□□□□ 0.49
MBD1-221	ENST00000589867	LGALS16	A8MUM7	142 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	PES1	O00541	588 aa	Known RBP	18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	PAPSS1	O43252	624 aa	Predicted RBP	18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	NBL1	P41271	181 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	SATB1	Q01826	763 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	IQCB1	Q15051	598 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	MSANTD2	Q6P1R3	559 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	TMEM110	Q86TL2	294 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	SCUBE3	Q8IX30	993 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	SIX6OS1	Q8N1H7	587 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	STK32A	Q8WU08	396 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	IRGQ	Q8WZA9	623 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	DDX1	Q92499	740 aa	Known RBP	18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	CD101	Q93033	1021 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	PIWIL1	Q96J94	861 aa	Known RBP	18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	MARCH2	Q9P0N8	246 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	OTOGL	Q3ZCN5	2332 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	FAM186A	A6NE01	2351 aa		18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	EP300	Q09472	2414 aa	Predicted RBP	18.13	■□□□□ 0.49
MBD1-221	ENST00000589867	PROB1	E7EW31	1015 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867		K7EQS6	105 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867		K7ESF4	209 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	HOXC11	O43248	304 aa	Predicted RBP	18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	LAMTOR5	O43504	91 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	ADH5	P11766	374 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	NR1H3	Q13133	447 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	LRRC32	Q14392	662 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	TRIP4	Q15650	581 aa	Predicted RBP	18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	SPEM1	Q8N4L4	309 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	CPXM1	Q96SM3	734 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	CDK5RAP1	Q96SZ6	601 aa	Known RBP	18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	IER2	Q9BTL4	223 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	STK33	Q9BYT3	514 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	MIS12	Q9H081	205 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	SPHK2	Q9NRA0	654 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	SFMBT1	Q9UHJ3	866 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	FBXO4	Q9UKT5	387 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	FRYL	O94915	3013 aa		18.12	■□□□□ 0.49
MBD1-221	ENST00000589867	SLC12A8	A0AV02	714 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867		E5RJQ4	531 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867		F8VZ95	297 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	TRIM24	O15164	1050 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	MED7	O43513	233 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	LTF	P02788	710 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	HMBS	P08397	361 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	DRD1	P21728	446 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	JAM2	P57087	298 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	CSTF1	Q05048	431 aa	Known RBP	18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	GRSF1	Q12849	480 aa	Known RBP eCLIP	18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	PDCL	Q13371	301 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	RAPGEF1	Q13905	1077 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	SYCP1	Q15431	976 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	BTBD8	Q5XKL5	378 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	PASD1	Q8IV76	773 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	FMNL3	Q8IVF7	1028 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	SYNPO	Q8N3V7	929 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	IRF2BPL	Q9H1B7	796 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	LHX5	Q9H2C1	402 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	ABCC13	Q9NSE7	274 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	AGO1	Q9UL18	857 aa	Known RBP	18.11	■□□□□ 0.49
MBD1-221	ENST00000589867		R4GN57	208 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	PTPRZ1	P23471	2315 aa	Predicted RBP	18.11	■□□□□ 0.49
MBD1-221	ENST00000589867	GVINP1	Q7Z2Y8	2422 aa		18.11	■□□□□ 0.49
MBD1-221	ENST00000589867		A0A0A0MRY4	1105 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	SYCE3	A1L190	88 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	GFRA2	O00451	464 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	MSI1	O43347	362 aa	Known RBP	18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	RNF40	O75150	1001 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	FBXO21	O94952	628 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	PAPSS2	O95340	614 aa	Predicted RBP	18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	ADH1C	P00326	375 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	CYP11B1	P15538	503 aa		18.1	■□□□□ 0.49

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