RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 LRRC38Q5VT99 294 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 FAM171A1Q5VUB5 890 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 ZNF280DQ6N043 979 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 ANKRD54Q6NXT1 300 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 MFSD7Q6UXD7 560 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 SPOCD1Q6ZMY3 1216 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 HFE2Q6ZVN8 426 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 CEP57Q86XR8 500 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 SPATA2LQ8IUW3 424 aaPredicted RBP10.64□□□□□ -0.71
APOC1-205ENST00000589781 C12orf76Q8N812 135 aaPredicted RBP10.64□□□□□ -0.71
APOC1-205ENST00000589781 PRELID2Q8N945 189 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 EXD1Q8NHP7 514 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 FAM172AQ8WUF8 416 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 KCTD13Q8WZ19 329 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 RAPGEF5Q92565 580 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 HSPH1Q92598 858 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 KCNK16Q96T55 309 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 HERC2P3Q9BVR0 1158 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 COLEC11Q9BWP8 271 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 HEMGNQ9BXL5 484 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 OSBPL8Q9BZF1 889 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 ZCWPW1Q9H0M4 648 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 SLITRK6Q9H5Y7 841 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 DMAP1Q9NPF5 467 aaPredicted RBP10.64□□□□□ -0.71
APOC1-205ENST00000589781 C11orf16Q9NQ32 467 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 GPATCH2LQ9NWQ4 482 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 DDX56Q9NY93 547 aaKnown RBP10.64□□□□□ -0.71
APOC1-205ENST00000589781 ABI2Q9NYB9 513 aaPredicted RBP10.64□□□□□ -0.71
APOC1-205ENST00000589781 STIM2Q9P246 746 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 R3HDM2Q9Y2K5 976 aaKnown RBP10.64□□□□□ -0.71
APOC1-205ENST00000589781 USP15Q9Y4E8 981 aaPredicted RBP10.64□□□□□ -0.71
APOC1-205ENST00000589781 GREB1Q4ZG55 1949 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 hCG_1818297A0A087WSY0 165 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 ESYT3A0FGR9 886 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 TTI1O43156 1089 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 ADAM12O43184 909 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 SART1O43290 800 aaKnown RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 TRAPPC3O43617 180 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 HSF2BPO75031 334 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 RNF8O76064 485 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 SOD2P04179 222 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 KRT7P08729 469 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 MYBL2P10244 700 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 KRT10P13645 584 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 PTPN9P43378 593 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 GPR15P49685 360 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 ATXN1P54253 815 aaKnown RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 DAOAP59103 153 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 PITX1P78337 314 aaPredicted RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 DSG1Q02413 1049 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 IFRD2Q12894 506 aaPredicted RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 SMAD4Q13485 552 aaKnown RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 BRD3Q15059 726 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 HADHQ16836 314 aaKnown RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 CTXN3Q4LDR2 81 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 RAB41Q5JT25 222 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 KCNT1Q5JUK3 1230 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 RTP2Q5QGT7 225 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 OTUD1Q5VV17 481 aaPredicted RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 KAZNQ674X7 775 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 WDR93Q6P2C0 686 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 TTC27Q6P3X3 843 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 POLNQ7Z5Q5 900 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 DEFB106AQ8N104 65 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 STKLD1Q8NE28 680 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 CASKIN2Q8WXE0 1202 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 MAGOHBQ96A72 148 aaKnown RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 TBCBQ99426 244 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 CDCA3Q99618 268 aaPredicted RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 FAM118BQ9BPY3 351 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 SNRNP25Q9BV90 132 aaKnown RBP10.63□□□□□ -0.71
APOC1-205ENST00000589781 RXFP1Q9HBX9 757 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 CSNK1G1Q9HCP0 422 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
APOC1-205ENST00000589781 AMACRQ9UHK6 382 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 USP18Q9UMW8 372 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 C5orf42Q9H799 3197 aa10.63□□□□□ -0.71
APOC1-205ENST00000589781 SYNJ2BP-COX16A0A087WUM0 186 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.62□□□□□ -0.71
APOC1-205ENST00000589781 CCDC151A5D8V7 595 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 C3orf70A6NLC5 250 aaPredicted RBP10.62□□□□□ -0.71
APOC1-205ENST00000589781 TEX28O15482 410 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 PRPSAP2O60256 369 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 FBXO21O94952 628 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 OAZ2O95190 189 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 ZRANB2O95218 330 aaKnown RBP eCLIP10.62□□□□□ -0.71
APOC1-205ENST00000589781 GLI1P08151 1106 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 CD48P09326 243 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 CPB1P15086 417 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 FGFR3P22607 806 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 CYP2F1P24903 491 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 PTPN7P35236 360 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 PCK1P35558 622 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 CDKN2BP42772 138 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 CLCN4P51793 760 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 ARPP19P56211 112 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 HDAC4P56524 1084 aa10.62□□□□□ -0.71
APOC1-205ENST00000589781 GUCY2DQ02846 1103 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms