RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ARL13BQ3SXY8 428 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 INTS6LQ5JSJ4 861 aaKnown RBP6.49□□□□□ -1.37
VPS25-204ENST00000589577 SFMBT2Q5VUG0 894 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 CDCP2Q5VXM1 449 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 BTBD8Q5XKL5 378 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 SCARA3Q6AZY7 606 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 GRAMD4Q6IC98 578 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 SDE2Q6IQ49 451 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 ZPBP2Q6X784 338 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 KANSL1Q7Z3B3 1105 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 FAM124AQ86V42 546 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 METTL23Q86XA0 190 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 SCN4BQ8IWT1 228 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 ADGRF2Q8IZF7 708 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 EXTL1Q92935 676 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 ELF4Q99607 663 aaPredicted RBP6.49□□□□□ -1.37
VPS25-204ENST00000589577 NUP58Q9BVL2 599 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 TTLL2Q9BWV7 592 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 PCED1AQ9H1Q7 454 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 EPN3Q9H201 632 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 BHMT2Q9H2M3 363 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 RPF1Q9H9Y2 349 aaKnown RBP6.49□□□□□ -1.37
VPS25-204ENST00000589577 KMT5AQ9NQR1 393 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 DNAJC17Q9NVM6 304 aaKnown RBP6.49□□□□□ -1.37
VPS25-204ENST00000589577 TBC1D14Q9P2M4 693 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 ADAMTS1Q9UHI8 967 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 GTF3C4Q9UKN8 822 aa6.49□□□□□ -1.37
VPS25-204ENST00000589577 NOL7Q9UMY1 257 aaKnown RBP6.49□□□□□ -1.37
VPS25-204ENST00000589577 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.49□□□□□ -1.37
VPS25-204ENST00000589577 NYNRINQ9P2P1 1898 aaKnown RBP6.49□□□□□ -1.37
VPS25-204ENST00000589577 PMS2P1A4D2B8 440 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 LAD1O00515 517 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 VILLO15195 856 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 XPOTO43592 962 aaKnown RBP6.48□□□□□ -1.37
VPS25-204ENST00000589577 DFNA5O60443 496 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 NEMFO60524 1076 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 GREM1O60565 184 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 TSPAN3O60637 253 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 CTDNEP1O95476 244 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 ITGB2P05107 769 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 IGHV4-34P06331 123 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 CISD3P0C7P0 127 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 MAPTP10636 758 aaKnown RBP6.48□□□□□ -1.37
VPS25-204ENST00000589577 CKMT2P17540 419 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 ACP1P24666 158 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 CD27P26842 260 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 EPHA8P29322 1005 aaPredicted RBP6.48□□□□□ -1.37
VPS25-204ENST00000589577 MAGEA11P43364 429 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 LSSP48449 732 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 TAF6P49848 677 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 TSPY1Q01534 308 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 ST3GAL1Q11201 340 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 CLN3Q13286 438 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 ORC1Q13415 861 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 IGFBP7Q16270 282 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 ANO4Q32M45 955 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 PROX2Q3B8N5 592 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 CCDC81Q6ZN84 652 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 BRAPQ7Z569 592 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 OSTM1Q86WC4 334 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 TMPRSS6Q8IU80 811 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 PDCL2Q8N4E4 241 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 FAM26EQ8N5C1 309 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 TMEM161BQ8NDZ6 487 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 FBXO18Q8NFZ0 1043 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 OTUB2Q96DC9 234 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 SIPA1Q96FS4 1042 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 LIN37Q96GY3 246 aaPredicted RBP6.48□□□□□ -1.37
VPS25-204ENST00000589577 SPATA17Q96L03 361 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 DRC1Q96MC2 740 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 DUSP9Q99956 384 aaKnown RBP6.48□□□□□ -1.37
VPS25-204ENST00000589577 SEMA3CQ99985 751 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 ACBD6Q9BR61 282 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 NTPCRQ9BSD7 190 aaKnown RBP6.48□□□□□ -1.37
VPS25-204ENST00000589577 RUSC1Q9BVN2 902 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 ZSCAN16Q9H4T2 348 aaPredicted RBP6.48□□□□□ -1.37
VPS25-204ENST00000589577 POLR1BQ9H9Y6 1135 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 TMEM30AQ9NV96 361 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 TRPM5Q9NZQ8 1165 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 CHMP5Q9NZZ3 219 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 PLEKHB1Q9UF11 243 aaPredicted RBP6.48□□□□□ -1.37
VPS25-204ENST00000589577 SEPT3Q9UH03 358 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 L1RE1Q9UN81 338 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 PCDHB6Q9Y5E3 794 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 MED13Q9UHV7 2174 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 DOCK9Q9BZ29 2069 aa6.48□□□□□ -1.37
VPS25-204ENST00000589577 SFI1A8K8P3 1242 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 KPNA7A9QM74 516 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 NEDD8-MDP1E9PL57 170 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 GOLGA6L22H0YM25 854 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 WNT9AO14904 365 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 COCHO43405 550 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 ATP2C2O75185 946 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 USP12O75317 370 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 BMP15O95972 392 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 ITGAVP06756 1048 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 C7P10643 843 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 MBL2P11226 248 aaPredicted RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 TYRP14679 529 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 ACO1P21399 889 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms