RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 COL28A1Q2UY09 1125 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 CCNI2Q6ZMN8 369 aaPredicted RBP16.08■□□□□ 0.16
ACTN4-211ENST00000589528 ZCCHC9Q8N567 271 aaKnown RBP16.08■□□□□ 0.16
ACTN4-211ENST00000589528 ZNF507Q8TCN5 953 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 TOE1Q96GM8 510 aaKnown RBP16.08■□□□□ 0.16
ACTN4-211ENST00000589528 KLF16Q9BXK1 252 aaPredicted RBP16.08■□□□□ 0.16
ACTN4-211ENST00000589528 TRIM9Q9C026 710 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 XYLT2Q9H1B5 865 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 CUEDC2Q9H467 287 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 PRDM16Q9HAZ2 1276 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 PLK2Q9NYY3 685 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 IL37Q9NZH6 218 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 MARK1Q9P0L2 795 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 UBE4BO95155 1302 aa16.08■□□□□ 0.16
ACTN4-211ENST00000589528 FAM92AA1XBS5 289 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 WASH3PC4AMC7 463 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 TGFB1I1O43294 461 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 EXOC3O60645 756 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 ACADMP11310 421 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 CCDC130P13994 396 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 SLC39A14Q15043 492 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 PAQR9Q6ZVX9 377 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 MDM1Q8TC05 714 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 SLC2A14Q8TDB8 520 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 UCMAQ8WVF2 138 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 HNRNPLLQ8WVV9 542 aaKnown RBP16.07■□□□□ 0.16
ACTN4-211ENST00000589528 ZNF516Q92618 1163 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 JAKMIP2Q96AA8 810 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 SMOQ99835 787 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 GPR174Q9BXC1 333 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 GAREM1Q9H706 876 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 CD248Q9HCU0 757 aa16.07■□□□□ 0.16
ACTN4-211ENST00000589528 URB1O60287 2271 aaKnown RBP16.06■□□□□ 0.16
ACTN4-211ENST00000589528 SYNCRIPO60506 623 aaKnown RBP16.06■□□□□ 0.16
ACTN4-211ENST00000589528 CAPNS1P04632 268 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 FAM200BP0CF97 657 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 MATKP42679 507 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 AP3M2P53677 418 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 NCOA4Q13772 614 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 STK38Q15208 465 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 FUT11Q495W5 492 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 C10orf120Q5SQS8 335 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 DCAF12L1Q5VU92 463 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 IL27RAQ6UWB1 636 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 EPM2AIP1Q7L775 607 aaPredicted RBP16.06■□□□□ 0.16
ACTN4-211ENST00000589528 DHX58Q96C10 678 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 VRTNQ9H8Y1 702 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 FAM49BQ9NUQ9 324 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 KBTBD4Q9NVX7 518 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 WSB2Q9NYS7 404 aaPredicted RBP16.06■□□□□ 0.16
ACTN4-211ENST00000589528 CGNQ9P2M7 1197 aaKnown RBP16.06■□□□□ 0.16
ACTN4-211ENST00000589528 PCOLCE2Q9UKZ9 415 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 NFE2L3Q9Y4A8 694 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 STON1Q9Y6Q2 735 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 APC2O95996 2303 aa16.06■□□□□ 0.16
ACTN4-211ENST00000589528 KNL1Q8NG31 2342 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 CABIN1Q9Y6J0 2220 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 GOLGA8CPA6NN73 597 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 BCAT2O15382 392 aaPredicted RBP16.05■□□□□ 0.16
ACTN4-211ENST00000589528 CYP26A1O43174 497 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 GREM1O60565 184 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 BEST1O76090 585 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 ADORA2BP29275 332 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 OXTRP30559 389 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 PLA2G4AP47712 749 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 CASP4P49662 377 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 PGFP49763 221 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 ORC1Q13415 861 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 E2F5Q15329 346 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 GLRX5Q86SX6 157 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 TADA2BQ86TJ2 420 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 ZMIZ2Q8NF64 920 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 CADM4Q8NFZ8 388 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 DNASE2BQ8WZ79 361 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 SNX19Q92543 992 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 PRCCQ92733 491 aaPredicted RBP16.05■□□□□ 0.16
ACTN4-211ENST00000589528 ELMO3Q96BJ8 720 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 SIPA1Q96FS4 1042 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 CYLDQ9NQC7 956 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 TM7SF3Q9NS93 570 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 DNMT3LQ9UJW3 386 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 SCML2Q9UQR0 700 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 MORC2Q9Y6X9 1032 aaPredicted RBP16.05■□□□□ 0.16
ACTN4-211ENST00000589528 CELSR3Q9NYQ7 3312 aa16.05■□□□□ 0.16
ACTN4-211ENST00000589528 TMEM131Q92545 1883 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 NPC1O15118 1278 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 MDM4O15151 490 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 CILPO75339 1184 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 CISD3P0C7P0 127 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 RARGP13631 454 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 ACO1P21399 889 aaKnown RBP16.04■□□□□ 0.16
ACTN4-211ENST00000589528 SYT1P21579 422 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 ZNF132P52740 706 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 NDST1P52848 882 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 ARID5AQ03989 594 aa16.04■□□□□ 0.16
ACTN4-211ENST00000589528 SOWAHCQ53LP3 525 aaPredicted RBP16.04■□□□□ 0.16
ACTN4-211ENST00000589528 METTL3Q86U44 580 aaKnown RBP16.04■□□□□ 0.16
ACTN4-211ENST00000589528 SLCO6A1Q86UG4 719 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms