RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 NACA2Q9H009 215 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 RNF38Q9H0F5 515 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 CCSER2Q9H7U1 834 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 TRPV4Q9HBA0 871 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 MYO1AQ9UBC5 1043 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 LCMT1Q9UIC8 334 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 NAALADL1Q9UQQ1 740 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 ADGRG1Q9Y653 693 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 A0A0A6YYK5 440 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-218ENST00000589294 C2CD4BA6NLJ0 364 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 BTNL10A8MVZ5 291 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 NRG2O14511 850 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-218ENST00000589294 PJA2O43164 708 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 GRAP2O75791 330 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 TBX18O95935 607 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 F9P00740 461 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 LAMP2P13473 410 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 PDGFRAP16234 1089 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 GBP1P32455 592 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 VAV2P52735 878 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 ZNF143P52747 638 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-218ENST00000589294 COG7P83436 770 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 SYPL2Q5VXT5 272 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 GET4Q7L5D6 327 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-218ENST00000589294 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 KIAA1958Q8N8K9 716 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 ARL14EPQ8N8R7 260 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-218ENST00000589294 FNIP1Q8TF40 1166 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 ATXN2LQ8WWM7 1075 aaKnown RBP12.71□□□□□ -0.37
DNMT1-218ENST00000589294 RXFP2Q8WXD0 754 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 ING5Q8WYH8 240 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 E2F7Q96AV8 911 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 ZSWIM3Q96MP5 696 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 NPY6RQ99463 290 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 SLITRK6Q9H5Y7 841 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 TRPC7Q9HCX4 862 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.37
DNMT1-218ENST00000589294 TDP1Q9NUW8 608 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 MARCH2Q9P0N8 246 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 THEGQ9P2T0 379 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 EPS15L1Q9UBC2 864 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 STAP1Q9ULZ2 295 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
DNMT1-218ENST00000589294 NR2E1Q9Y466 385 aa12.71□□□□□ -0.37
DNMT1-218ENST00000589294 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.38
DNMT1-218ENST00000589294 EYSQ5T1H1 3165 aa12.71□□□□□ -0.38
DNMT1-218ENST00000589294 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 DPYSL4O14531 572 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 MTA2O94776 668 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ENDOD1O94919 500 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 CKMP06732 381 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 TCF3P15923 654 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 DESP17661 470 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 GPD1P21695 349 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 SDC4P31431 198 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 GBP2P32456 591 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 FLT3P36888 993 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 PTPN9P43378 593 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 RPL7AP62424 266 aaKnown RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 TFF2Q03403 129 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 EFEMP1Q12805 493 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 KIF5AQ12840 1032 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 NNTQ13423 1086 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ACAP1Q15027 740 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 CCDC14Q49A88 953 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 STXBP5Q5T5C0 1151 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ZNF662Q6ZS27 426 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 KIAA1328Q86T90 577 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ACRBPQ8NEB7 543 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 JOSD2Q8TAC2 188 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ZSCAN18Q8TBC5 510 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 SLC35G2Q8TBE7 412 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 RFFLQ8WZ73 363 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 CENPIQ92674 756 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 SMARCD2Q92925 531 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ARHGEF26Q96DR7 871 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 PGAP3Q96FM1 320 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ZNF830Q96NB3 372 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ASB16Q96NS5 453 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 MCEEQ96PE7 176 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 SLC22A12Q96S37 553 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 MYADMQ96S97 322 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 NCAPGQ9BPX3 1015 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 CNPY3Q9BT09 278 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 NUP85Q9BW27 656 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 KLF16Q9BXK1 252 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 KCNF1Q9H3M0 494 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 SMOC2Q9H3U7 446 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 PRDM6Q9NQX0 595 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 OBP2AQ9NY56 170 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 CTTNBP2NLQ9P2B4 639 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 NUDT5Q9UKK9 219 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 ARHGAP26Q9UNA1 814 aa12.7□□□□□ -0.38
DNMT1-218ENST00000589294 HBS1LQ9Y450 684 aaKnown RBP12.7□□□□□ -0.38
DNMT1-218ENST00000589294 C2orf16Q68DN1 1984 aa12.69□□□□□ -0.38
DNMT1-218ENST00000589294 MYO1FO00160 1098 aa12.69□□□□□ -0.38
DNMT1-218ENST00000589294 ATMINO43313 823 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms