RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 FAM172AQ8WUF8 416 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 KBTBD7Q8WVZ9 684 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 TMEM40Q8WWA1 233 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 P3H4Q92791 437 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 ARHGEF2Q92974 986 aaKnown RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 FAF2Q96CS3 445 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 SCLYQ96I15 445 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 FRMD8Q9BZ67 464 aaPredicted RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 UBN1Q9NPG3 1134 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 FAM49BQ9NUQ9 324 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 DNAJC17Q9NVM6 304 aaKnown RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 SLC24A2Q9UI40 661 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 HES2Q9Y543 173 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 PCDHA11Q9Y5I1 949 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 FAM169AQ9Y6X4 670 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 TANC1Q9C0D5 1861 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 EXOC1LA0A1B0GW35 172 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 E7ESA3 106 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 MYO1CO00159 1063 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 TULP2O00295 520 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 APOL1O14791 398 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 XPO1O14980 1071 aaKnown RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 DAB1O75553 588 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 CD48P09326 243 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 ZSCAN5DPP0CG00 497 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 RBP3P10745 1247 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 ATP2A2P16615 1042 aaKnown RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 DRD4P21917 467 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 AKAP5P24588 427 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 GNL1P36915 607 aaPredicted RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 SEC24CP53992 1094 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 RNASELQ05823 741 aaKnown RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 CBLBQ13191 982 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 C15orf59Q2T9L4 293 aaPredicted RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 KLHL38Q2WGJ6 581 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 SLC9A4Q6AI14 798 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 TWF2Q6IBS0 349 aaKnown RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 PMF1Q6P1K2 205 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 STRADAQ7RTN6 431 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 DEFB128Q7Z7B8 93 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 EXOC3L1Q86VI1 746 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 FAM228AQ86W67 206 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 CACNA2D3Q8IZS8 1091 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 NAT8LQ8N9F0 302 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 SMG8Q8ND04 991 aaKnown RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 SPATA18Q8TC71 538 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 CPT1BQ92523 772 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 RTP4Q96DX8 246 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 PIWIL1Q96J94 861 aaKnown RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 C9orf72Q96LT7 481 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 RNF157Q96PX1 679 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 SNRNP25Q9BV90 132 aaKnown RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 PRDM12Q9H4Q4 367 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 RABEP2Q9H5N1 569 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 PCDH18Q9HCL0 1135 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 NGRNQ9NPE2 291 aaKnown RBP10.36□□□□□ -0.75
VPS25-202ENST00000589219 CHST12Q9NRB3 414 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 EURLQ9NYK6 297 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 PAK5Q9P286 719 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 NME7Q9Y5B8 376 aa10.36□□□□□ -0.75
VPS25-202ENST00000589219 CHD9Q3L8U1 2897 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 CHADO15335 359 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 SPAG6O75602 509 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 PARNO95453 639 aaKnown RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 FGFR1P11362 822 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 CCDC130P13994 396 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 ETS1P14921 441 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 PAX3P23760 479 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 ADORA2BP29275 332 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 RPL22P35268 128 aaKnown RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 DPYSL2Q16555 572 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 CDO1Q16878 200 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 EFHC1Q5JVL4 640 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 GKAP1Q5VSY0 366 aaPredicted RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 PPP2R2DQ66LE6 453 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 TADA2BQ86TJ2 420 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 PRUNE1Q86TP1 453 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 RPAINQ86UA6 219 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 PSTKQ8IV42 348 aaKnown RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 ZBED8Q8IZ13 594 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 TMEM86AQ8N2M4 240 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 PHOSPHO2Q8TCD6 241 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 CENPIQ92674 756 aaPredicted RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 PWWP2AQ96N64 755 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 PPP1R10Q96QC0 940 aaKnown RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 SLC9A7Q96T83 725 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 HNRNPABQ99729 332 aaKnown RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 C11orf84Q9BUA3 381 aaPredicted RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 CXCL16Q9H2A7 254 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 NKX2-4Q9H2Z4 354 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 DPEP3Q9H4B8 488 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 RCOR3Q9P2K3 495 aaPredicted RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 PSMC3IPQ9P2W1 217 aaPredicted RBP10.35□□□□□ -0.75
VPS25-202ENST00000589219 GTF2IRD1Q9UHL9 959 aa10.35□□□□□ -0.75
VPS25-202ENST00000589219 KAT6AQ92794 2004 aa10.34□□□□□ -0.75
VPS25-202ENST00000589219 TMEM120BA0PK00 339 aa10.34□□□□□ -0.75
VPS25-202ENST00000589219 BCLAF3A2AJT9 711 aaKnown RBP10.34□□□□□ -0.75
VPS25-202ENST00000589219 H7C0C1 242 aa10.34□□□□□ -0.75
VPS25-202ENST00000589219 SPTLC1O15269 473 aa10.34□□□□□ -0.75
VPS25-202ENST00000589219 GRAP2O75791 330 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms