RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 RIPK1Q13546 671 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 MPP2Q14168 576 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CCDC142Q17RM4 750 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 HP1BP3Q5SSJ5 553 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ILDR2Q71H61 639 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 SESTD1Q86VW0 696 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 TEKT4Q8WW24 435 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CPT1BQ92523 772 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 APBB2Q92870 758 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 COPS5Q92905 334 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 MYO19Q96H55 970 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CRELD1Q96HD1 420 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CLMNQ96JQ2 1002 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 FGD4Q96M96 766 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 LRRC37BQ96QE4 947 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 FERMT1Q9BQL6 677 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ELOVL4Q9GZR5 314 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 KLC2Q9H0B6 622 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 SRA1Q9HD15 236 aaKnown RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 SAE1Q9UBE0 346 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 PRKAG3Q9UGI9 489 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CYTH4Q9UIA0 394 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 INPP5FQ9Y2H2 1132 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 WDR90Q96KV7 1748 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 C2CD4BA6NLJ0 364 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF487B1APH4 448 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 EIF1AYO14602 144 aaKnown RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CHADO15335 359 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 XPOTO43592 962 aaKnown RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 SPAG7O75391 227 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 UBOX5O94941 541 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 MT-ND3P03897 115 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 INHBAP08476 426 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 IQCF3P0C7M6 154 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 TROVE2P10155 538 aaKnown RBP eCLIP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CETPP11597 493 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 MZF1P28698 734 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 BCAR1P56945 870 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 PKN2Q16513 984 aaKnown RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 BBS9Q3SYG4 887 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 TMEM63BQ5T3F8 832 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 MTHFD1LQ6UB35 978 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 BZW1Q7L1Q6 419 aaKnown RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 RPAINQ86UA6 219 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 PNMA8AQ86V59 439 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 TMEM192Q8IY95 271 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ALDH16A1Q8IZ83 802 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ARFGAP1Q8N6T3 406 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 FBXO36Q8NEA4 188 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 BEST2Q8NFU1 509 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 UBA3Q8TBC4 463 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 DENND1AQ8TEH3 1009 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 RXFP2Q8WXD0 754 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CDCA5Q96FF9 252 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 CPB2Q96IY4 423 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 TSPAN18Q96SJ8 248 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 IQCGQ9H095 443 aaKnown RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 SDCBP2Q9H190 292 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ECT2Q9H8V3 914 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 PDGFCQ9NRA1 345 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ABCF3Q9NUQ8 709 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 TSPAN16Q9UKR8 245 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 PHTF1Q9UMS5 762 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 APOL1O14791 398 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ENDOD1O94919 500 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 VTNP04004 478 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 CYP2C8P10632 490 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 NEFHP12036 1026 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 RPA3P35244 121 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 GCLCP48506 637 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 PTPN5P54829 565 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SLC8A3P57103 927 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ELF3P78545 371 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SARNPP82979 210 aaKnown RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF200P98182 395 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SF3A3Q12874 501 aaKnown RBP eCLIP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 FASTKD3Q14CZ7 662 aaKnown RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 NOMO1Q15155 1222 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 DGKDQ16760 1214 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 GALNTL6Q49A17 601 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 PPP1R26Q5T8A7 1209 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SCARA3Q6AZY7 606 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SCYL2Q6P3W7 929 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 TBC1D1Q86TI0 1168 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 DPP9Q86TI2 863 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 UNC93AQ86WB7 457 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 UNC45BQ8IWX7 931 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 KIAA0319LQ8IZA0 1049 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 LRRC52Q8N7C0 313 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 KDF1Q8NAX2 398 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 NLGN2Q8NFZ4 835 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF398Q8TD17 642 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 GPR152Q8TDT2 470 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 USP6NLQ92738 828 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 FAF2Q96CS3 445 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 LRRC39Q96DD0 335 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 RNF157Q96PX1 679 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 PAFAH2Q99487 392 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 TUBB6Q9BUF5 446 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms