RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ELSPBP1Q96BH3 223 aa19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 LRRC3BQ96PB8 259 aa19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 CDK5RAP1Q96SZ6 601 aaKnown RBP19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 ISCUQ9H1K1 167 aa19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 DNMT3LQ9UJW3 386 aa19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 STRIP2Q9ULQ0 834 aa19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 NENFQ9UMX5 172 aa19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 NAALADL1Q9UQQ1 740 aa19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 TRIOO75962 3097 aa19.85■□□□□ 0.77
CLPTM1-209ENST00000588855 HEPACAM2A8MVW5 462 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 DPYSL4O14531 572 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 ECI2O75521 394 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 FTLP02792 175 aaPredicted RBP19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 NCAM1P13591 858 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 GSCP56915 257 aaPredicted RBP19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 USP4Q13107 963 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 SYPL2Q5VXT5 272 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 MSANTD2Q6P1R3 559 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 MIB1Q86YT6 1006 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 DEFB106AQ8N104 65 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 GJD3Q8N144 294 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 CELF5Q8N6W0 485 aaKnown RBP19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 TTC16Q8NEE8 873 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 SH3RF2Q8TEC5 729 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 CCDC42Q96M95 316 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 SLC2A13Q96QE2 648 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 KIF9Q9HAQ2 790 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 METTL5Q9NRN9 209 aaKnown RBP19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 OLA1Q9NTK5 396 aaKnown RBP19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 SFMBT1Q9UHJ3 866 aa19.84■□□□□ 0.77
CLPTM1-209ENST00000588855 GOLGA6L6A8MZA4 724 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 LEFTY2O00292 366 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 CAPN9O14815 690 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 ATMINO43313 823 aaPredicted RBP19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 AKR1B10O60218 316 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 DAB1O75553 588 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 GJB6O95452 261 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 FECHP22830 423 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 RNASE9P60153 205 aaKnown RBP19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 ZNF77Q15935 545 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 SLC18A3Q16572 532 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 ALKBH5Q6P6C2 394 aaKnown RBP19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 BEND5Q7L4P6 421 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 DQX1Q8TE96 717 aaKnown RBP19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 UHRF1Q96T88 793 aaPredicted RBP19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 TRIM62Q9BVG3 475 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 GKN1Q9NS71 199 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 SPTLC3Q9NUV7 552 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 MARCH2Q9P0N8 246 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 IGSF9Q9P2J2 1179 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 WDR35Q9P2L0 1181 aa19.83■□□□□ 0.77
CLPTM1-209ENST00000588855 TCRBV5S1A1TA0A578 114 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 IRF1P10914 325 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 RRM1P23921 792 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 PITX1P78337 314 aaPredicted RBP19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 GRM2Q14416 872 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 DCAF6Q58WW2 860 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 CCDC122Q5T0U0 273 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 RNF135Q8IUD6 432 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 C3orf20Q8ND61 904 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 NXPE3Q969Y0 559 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 E2F7Q96AV8 911 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 VCPIP1Q96JH7 1222 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 KLF16Q9BXK1 252 aaPredicted RBP19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 OBP2AQ9NY56 170 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 TMEM59LQ9UK28 342 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 NCOR1O75376 2440 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 BDP1A6H8Y1 2624 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 MUC3AQ02505 3323 aa19.82■□□□□ 0.76
CLPTM1-209ENST00000588855 MSI1O43347 362 aaKnown RBP19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 TCF3P15923 654 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 FLT3P36888 993 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 TRNP1Q6NT89 227 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 DNAJC24Q6P3W2 148 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 TAC4Q86UU9 113 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 JOSD2Q8TAC2 188 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 ADAM32Q8TC27 787 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 BPIFB1Q8TDL5 484 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 WBP2Q969T9 261 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 ZNF653Q96CK0 615 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 SELENOOQ9BVL4 669 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 SMOC2Q9H3U7 446 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 CFAP97Q9P2B7 532 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 SLC12A8A0AV02 714 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 SCAMP3O14828 347 aaKnown RBP19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 HMBSP08397 361 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 ABCB4P21439 1286 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 MTF1Q14872 753 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 TMEM139Q8IV31 216 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 MFSD6LQ8IWD5 586 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 SLC44A3Q8N4M1 653 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 EMC1Q8N766 993 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 DEPDC1BQ8WUY9 529 aa19.81■□□□□ 0.76
CLPTM1-209ENST00000588855 TTC28Q96AY4 2481 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 SOWAHDA6NJG2 315 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 KRT3P12035 628 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 PSMC3P17980 439 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 NOS2P35228 1153 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 MATKP42679 507 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 GSDMDP57764 484 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms