RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TGS1Q96RS0 853 aaKnown RBP21.32■■□□□ 1
ATG4D-204ENST00000586417 NCAPGQ9BPX3 1015 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 FAM118BQ9BPY3 351 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 HERC2P3Q9BVR0 1158 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 ULBP1Q9BZM6 244 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 TRIM31Q9BZY9 425 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 MYO9BQ13459 2157 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 C5orf67F2Z3F1 127 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 TBC1D4O60343 1298 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 FBXO21O94952 628 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 BDNFP23560 247 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 DAOAP59103 153 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 ERVK-21P61565 698 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 YWHAZP63104 245 aaKnown RBP21.31■■□□□ 1
ATG4D-204ENST00000586417 HLTFQ14527 1009 aaKnown RBP eCLIP21.31■■□□□ 1
ATG4D-204ENST00000586417 KIAA1841Q6NSI8 718 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 DEFB106AQ8N104 65 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 KCTD6Q8NC69 237 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 SPPL3Q8TCT6 385 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 SLC2A13Q96QE2 648 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 TBCBQ99426 244 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 VIPAS39Q9H9C1 493 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 CNGB3Q9NQW8 809 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.31■■□□□ 1
ATG4D-204ENST00000586417 OGFRQ9NZT2 677 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 CALCOCO1Q9P1Z2 691 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 RWDD3Q9Y3V2 267 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 ADAM12O43184 909 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 LIASO43766 372 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 GLUD2P49448 558 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 ATXN1P54253 815 aaKnown RBP21.31■■□□□ 1
ATG4D-204ENST00000586417 DSG1Q02413 1049 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 RAB30Q15771 203 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 BOLA3Q53S33 107 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 OTUD1Q5VV17 481 aaPredicted RBP21.31■■□□□ 1
ATG4D-204ENST00000586417 PPP2R2DQ66LE6 453 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 BBS12Q6ZW61 710 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 BHLHA9Q7RTU4 235 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 BNIPLQ7Z465 357 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 ATL2Q8NHH9 583 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 PIK3R5Q8WYR1 880 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 NT5C3BQ969T7 300 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 FAM149B1Q96BN6 582 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 DMAP1Q9NPF5 467 aaPredicted RBP21.31■■□□□ 1
ATG4D-204ENST00000586417 GRHL1Q9NZI5 618 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 HPCAL4Q9UM19 191 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 NEU2Q9Y3R4 380 aa21.31■■□□□ 1
ATG4D-204ENST00000586417 PATJQ8NI35 1801 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 SPDYE4A6NLX3 237 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 DESP17661 470 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 RPL21P46778 160 aaKnown RBP21.3■■□□□ 1
ATG4D-204ENST00000586417 ERVFC1P60507 584 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 PSMD5Q16401 504 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 ZNF280DQ6N043 979 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 SCYL2Q6P3W7 929 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 DRICH1Q6PGQ1 229 aaPredicted RBP21.3■■□□□ 1
ATG4D-204ENST00000586417 HFE2Q6ZVN8 426 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 ANKS3Q6ZW76 656 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 STRADAQ7RTN6 431 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 SNRNP25Q9BV90 132 aaKnown RBP21.3■■□□□ 1
ATG4D-204ENST00000586417 ZCWPW1Q9H0M4 648 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 ZBP1Q9H171 429 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 ZDHHC18Q9NUE0 388 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 COLQQ9Y215 455 aaPredicted RBP21.3■■□□□ 1
ATG4D-204ENST00000586417 SNX24Q9Y343 169 aa21.3■■□□□ 1
ATG4D-204ENST00000586417 COL4A4P53420 1690 aaPredicted RBP21.3■■□□□ 1
ATG4D-204ENST00000586417 MDM4O15151 490 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 GRM6O15303 877 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 FYNP06241 537 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 CDH6P55285 790 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 CAMK1Q14012 370 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 DPYSL3Q14195 570 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 SLC25A52Q3SY17 297 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 ZDHHC24Q6UX98 284 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 SYDE1Q6ZW31 735 aaPredicted RBP21.29■■□□□ 1
ATG4D-204ENST00000586417 MREGQ8N565 214 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 TSEN2Q8NCE0 465 aaKnown RBP21.29■■□□□ 1
ATG4D-204ENST00000586417 FAM71BQ8TC56 605 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 GRK7Q8WTQ7 553 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 POF1BQ8WVV4 589 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 SLC28A3Q9HAS3 691 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 PNPLA8Q9NP80 782 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 GPATCH2LQ9NWQ4 482 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 MTRRQ9UBK8 725 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 DNPEPQ9ULA0 475 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 CDY1Q9Y6F8 540 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 REV3LO60673 3130 aa21.29■■□□□ 1
ATG4D-204ENST00000586417 YJEFN3A6XGL0 299 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 E7ENQ6 273 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 RRP9O43818 475 aaKnown RBP21.28■■□□□ 1
ATG4D-204ENST00000586417 CST8O60676 142 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 RB1P06400 928 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 NOS2P35228 1153 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 ARPP19P56211 112 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 PITX1P78337 314 aaPredicted RBP21.28■■□□□ 1
ATG4D-204ENST00000586417 PTK6Q13882 451 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 CA9Q16790 459 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 ZC3H12AQ5D1E8 599 aaKnown RBP21.28■■□□□ 1
ATG4D-204ENST00000586417 ARNTL2Q8WYA1 636 aa21.28■■□□□ 1
ATG4D-204ENST00000586417 NPY6RQ99463 290 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms