RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CCDC112Q8NEF3 446 aa15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 OLIG1Q8TAK6 271 aa15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 ELSPBP1Q96BH3 223 aa15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 CYP2S1Q96SQ9 504 aa15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 MRPL47Q9HD33 250 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 PARVAQ9NVD7 372 aa15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 THG1LQ9NWX6 298 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 LIMD1Q9UGP4 676 aa15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 LSM7Q9UK45 103 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 CPQQ9Y646 472 aa15.25■□□□□ 0.03
SCAMP4-209ENST00000585335 ANAPC1Q9H1A4 1944 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 GRAP2O75791 330 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 KRT3P12035 628 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 ABCB4P21439 1286 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 FECHP22830 423 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 GBP1P32455 592 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 NOS2P35228 1153 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 MATKP42679 507 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 HTR4Q13639 388 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 ASTE1Q2TB18 679 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 DCUN1D2Q6PH85 259 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 DEFB106AQ8N104 65 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 TTC16Q8NEE8 873 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 DEPDC1BQ8WUY9 529 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 CTNNBL1Q8WYA6 563 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 USP13Q92995 863 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 PIWIL1Q96J94 861 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 SERPINB11Q96P15 392 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 SLC2A13Q96QE2 648 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 SLC22A12Q96S37 553 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 RNF38Q9H0F5 515 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 SMOC2Q9H3U7 446 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 FAM204AQ9H8W3 233 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 METTL5Q9NRN9 209 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 SPTLC3Q9NUV7 552 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 SMPD4Q9NXE4 827 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 CNOT8Q9UFF9 292 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 NUDT5Q9UKK9 219 aa15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 HBS1LQ9Y450 684 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 NUP210Q8TEM1 1887 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-209ENST00000585335 SLC12A8A0AV02 714 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 SIGLEC16A6NMB1 481 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 HEPACAM2A8MVW5 462 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 ANHXE9PGG2 379 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 PRAMEF12O95522 483 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 TBX18O95935 607 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 H2AFZP0C0S5 128 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 TCF3P15923 654 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 RRM1P23921 792 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 TAF5Q15542 800 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 PARM1Q6UWI2 310 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 H2AFVQ71UI9 128 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 PHLDB2Q86SQ0 1253 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 TXLNBQ8N3L3 684 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 BPIFB1Q8TDL5 484 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 SH3RF2Q8TEC5 729 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 PLD4Q96BZ4 506 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 KXD1Q9BQD3 176 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 DCLK3Q9C098 648 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 SMG9Q9H0W8 520 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 MYO1AQ9UBC5 1043 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 NAALADL1Q9UQQ1 740 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 SH3BP1Q9Y3L3 701 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 PAXBP1Q9Y5B6 917 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 NUMBLQ9Y6R0 609 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 PRUNE2Q8WUY3 3088 aa15.23■□□□□ 0.03
SCAMP4-209ENST00000585335 DOCK8Q8NF50 2099 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 SOWAHDA6NJG2 315 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 EIF3CLB5ME19 914 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 LEFTY2O00292 366 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 SLC9A3R1O14745 358 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 MDM4O15151 490 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 FYNP06241 537 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 FCARP24071 287 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 SDC4P31431 198 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 VIPR2P41587 438 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 GALCP54803 685 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 GPC5P78333 572 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 USP4Q13107 963 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 NNTQ13423 1086 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 TANGO2Q6ICL3 276 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 PLEKHA7Q6IQ23 1121 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 SND1Q7KZF4 910 aaKnown RBP eCLIP15.22■□□□□ 0.035e-8■□□□□ 11
SCAMP4-209ENST00000585335 MFSD6LQ8IWD5 586 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 KIAA1958Q8N8K9 716 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 DQX1Q8TE96 717 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 FGF14Q92915 247 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 EIF3CQ99613 913 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 KCNK12Q9HB15 430 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 CFAP97Q9P2B7 532 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 SFMBT1Q9UHJ3 866 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 TMEM59LQ9UK28 342 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 INTUQ9ULD6 942 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 NENFQ9UMX5 172 aa15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 EPN1Q9Y6I3 576 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-209ENST00000585335 E2F8A0AVK6 867 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 ATMINO43313 823 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms