RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 CLUL1Q15846 466 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 CTC1Q2NKJ3 1217 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 BOLA3Q53S33 107 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 NUGGCQ68CJ6 796 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 BHLHA9Q7RTU4 235 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 POLNQ7Z5Q5 900 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 SCD5Q86SK9 330 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 TMC8Q8IU68 726 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 UNC45BQ8IWX7 931 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 RHOT1Q8IXI2 618 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 KIAA1958Q8N8K9 716 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 CLEC4CQ8WTT0 213 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 NPY6RQ99463 290 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 DCLK3Q9C098 648 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 ADAM7Q9H2U9 754 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 KIF9Q9HAQ2 790 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRIM47-202ENST00000585333 DDIT4Q9NX09 232 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 CLDND1Q9NY35 253 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 DDX56Q9NY93 547 aaKnown RBP13.49□□□□□ -0.25
TRIM47-202ENST00000585333 MARCH2Q9P0N8 246 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 CHORDC1Q9UHD1 332 aaPredicted RBP13.49□□□□□ -0.25
TRIM47-202ENST00000585333 FAM50BQ9Y247 325 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 TLR6Q9Y2C9 796 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 MRPS23Q9Y3D9 190 aaKnown RBP13.49□□□□□ -0.25
TRIM47-202ENST00000585333 ESPNB1AK53 854 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 M0QYT0 321 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 SOX1O00570 391 aaPredicted RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 BUB1BO60566 1050 aaPredicted RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 GRAP2O75791 330 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 ENDOD1O94919 500 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 MOCS3O95396 460 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 TRUB2O95900 331 aaKnown RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 FOSL2P15408 326 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 WEE1P30291 646 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 CCR1P32246 355 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 AVPR1AP37288 418 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 GNG11P61952 73 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 RARS2Q5T160 578 aaKnown RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 SLFN11Q7Z7L1 901 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 MAP7D3Q8IWC1 876 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 EMC1Q8N766 993 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 JOSD2Q8TAC2 188 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 DQX1Q8TE96 717 aaKnown RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 FAM172AQ8WUF8 416 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 CENPIQ92674 756 aaPredicted RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 RNF34Q969K3 372 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 E2F7Q96AV8 911 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 PLD4Q96BZ4 506 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 ZNF707Q96C28 371 aaPredicted RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 LRCH3Q96II8 777 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 DDX50Q9BQ39 737 aaKnown RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 TASP1Q9H6P5 420 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 DONSONQ9NYP3 566 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 GDE1Q9NZC3 331 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 DNMT3BQ9UBC3 853 aaKnown RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 LSM7Q9UK45 103 aaKnown RBP13.48□□□□□ -0.25
TRIM47-202ENST00000585333 COG5Q9UP83 839 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 ZNF510Q9Y2H8 683 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 MYO16Q9Y6X6 1858 aa13.48□□□□□ -0.25
TRIM47-202ENST00000585333 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 IRAK2O43187 625 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 PALMO75781 387 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 LATS1O95835 1130 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 OAS1P00973 400 aaKnown RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 CKMP06732 381 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 HDCP19113 662 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 FSHRP23945 695 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 HTR7P34969 479 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 SSR1P43307 286 aaKnown RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 HARS2P49590 506 aaKnown RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 ETF1P62495 437 aaKnown RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 ATP11AP98196 1134 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 TAF5Q15542 800 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 TRIP4Q15650 581 aaPredicted RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 CCDC14Q49A88 953 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 ZNF569Q5MCW4 686 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 TMC5Q6UXY8 1006 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 GRASPQ7Z6J2 395 aaPredicted RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 DNAAF5Q86Y56 855 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 MICALL1Q8N3F8 863 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 DEFB123Q8N688 67 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 ATP6V0D2Q8N8Y2 350 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 LRRC57Q8N9N7 239 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 TEKT4Q8WW24 435 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 EDEM1Q92611 657 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 NTAN1Q96AB6 310 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 PIWIL1Q96J94 861 aaKnown RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 CFAP57Q96MR6 1250 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 LRRC3Q9BY71 257 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 SLITRK6Q9H5Y7 841 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 NMUR1Q9HB89 426 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 IL21Q9HBE4 155 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms