RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 ULBP1Q9BZM6 244 aa18.76■□□□□ 0.59
SRSF1-209ENST00000585096 DCLK3Q9C098 648 aa18.76■□□□□ 0.59
SRSF1-209ENST00000585096 MARK1Q9P0L2 795 aa18.76■□□□□ 0.59
SRSF1-209ENST00000585096 PRR5-ARHGAP8B1AHC4 643 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 NEDD8-MDP1E9PL57 170 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 TULP2O00295 520 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 STC2O76061 302 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 ALDH1A2O94788 518 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 SDHBP21912 280 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 ARHGAP8P85298 464 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 SPEM2Q0P670 501 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 MESP2Q0VG99 397 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 CNGA2Q16280 664 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 CRY1Q16526 586 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 EOGTQ5NDL2 527 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 TPGS1Q6ZTW0 290 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 RRAGAQ7L523 313 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 PHTF2Q8N3S3 785 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 ALLCQ8N6M5 410 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 MLKLQ8NB16 471 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 KCTD13Q8WZ19 329 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 LOXL4Q96JB6 756 aa18.75■□□□□ 0.59
SRSF1-209ENST00000585096 HELZP42694 1942 aaKnown RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 KLF8O95600 359 aaPredicted RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 TYRP14679 529 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 TGM1P22735 817 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 TIE1P35590 1138 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 KIR2DL1P43626 348 aaPredicted RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 ADIGQ0VDE8 80 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 GRAMD4Q6IC98 578 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 Q6ZNB5 142 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 TRMT11Q7Z4G4 463 aaKnown RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 CREBRFQ8IUR6 639 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 TERB1Q8NA31 727 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 IL17RCQ8NAC3 791 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 TXNDC5Q8NBS9 432 aaKnown RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 RBBP8NLQ8NC74 664 aaPredicted RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 TFAP2BQ92481 460 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 KAT5Q92993 513 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 RMDN1Q96DB5 314 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 INTS2Q9H0H0 1204 aaKnown RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 PARD6AQ9NPB6 346 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 OLA1Q9NTK5 396 aaKnown RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 DNAJC17Q9NVM6 304 aaKnown RBP18.74■□□□□ 0.59
SRSF1-209ENST00000585096 MARCH2Q9P0N8 246 aa18.74■□□□□ 0.59
SRSF1-209ENST00000585096 RNF225M0QZC1 329 aaPredicted RBP18.73■□□□□ 0.59
SRSF1-209ENST00000585096 CACNG3O60359 315 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 FOXD2O60548 495 aaPredicted RBP18.73■□□□□ 0.59
SRSF1-209ENST00000585096 HMBSP08397 361 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 CHKAP35790 457 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 FOXK2Q01167 660 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 PUM1Q14671 1186 aaKnown RBP eCLIP18.73■□□□□ 0.59
SRSF1-209ENST00000585096 PKDCCQ504Y2 493 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 USP39Q53GS9 565 aaKnown RBP18.73■□□□□ 0.59
SRSF1-209ENST00000585096 C10orf76Q5T2E6 689 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 EMC10Q5UCC4 262 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 KBTBD6Q86V97 674 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 C11orf74Q86VG3 221 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 ARHGEF19Q8IW93 802 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 SFTPA1Q8IWL2 248 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 RNF139Q8WU17 664 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 CNOT6LQ96LI5 555 aaKnown RBP18.73■□□□□ 0.59
SRSF1-209ENST00000585096 CLSTN2Q9H4D0 955 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 POLMQ9NP87 494 aaPredicted RBP18.73■□□□□ 0.59
SRSF1-209ENST00000585096 CNGB3Q9NQW8 809 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 SEMA4GQ9NTN9 838 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.73■□□□□ 0.595e-6■■□□□ 11.8
SRSF1-209ENST00000585096 WDR87Q6ZQQ6 2873 aa18.73■□□□□ 0.59
SRSF1-209ENST00000585096 SLC12A8A0AV02 714 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 ANTXRLA6NF34 631 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 M0QYV0 167 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 SGK1O00141 431 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 KLKB1P03952 638 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 CORO1AP31146 461 aaKnown RBP18.72■□□□□ 0.59
SRSF1-209ENST00000585096 CSRP2Q16527 193 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 RSPO4Q2I0M5 234 aaPredicted RBP18.72■□□□□ 0.59
SRSF1-209ENST00000585096 BSPRYQ5W0U4 402 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 ANO7Q6IWH7 933 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 ERMP1Q7Z2K6 904 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 RASSF3Q86WH2 238 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 SCML4Q8N228 414 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 SLC35F5Q8WV83 523 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 NDRG1Q92597 394 aaKnown RBP18.72■□□□□ 0.59
SRSF1-209ENST00000585096 ZC3H10Q96K80 434 aaKnown RBP18.72■□□□□ 0.59
SRSF1-209ENST00000585096 FAM81BQ96LP2 452 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 ABCC13Q9NSE7 274 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 STARD13Q9Y3M8 1113 aa18.72■□□□□ 0.59
SRSF1-209ENST00000585096 RHOBTB1O94844 696 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 KRT5P13647 590 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 LCP1P13796 627 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 BRD2P25440 801 aaKnown RBP18.71■□□□□ 0.59
SRSF1-209ENST00000585096 DGKGP49619 791 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 ZNF132P52740 706 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 ELF2Q15723 593 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 TPD52L1Q16890 204 aaPredicted RBP18.71■□□□□ 0.59
SRSF1-209ENST00000585096 TMEM92Q6UXU6 159 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 ENOSF1Q7L5Y1 443 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 BHLHA9Q7RTU4 235 aa18.71■□□□□ 0.59
SRSF1-209ENST00000585096 ZNF513Q8N8E2 541 aaPredicted RBP18.71■□□□□ 0.59
SRSF1-209ENST00000585096 IRGQQ8WZA9 623 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms