RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PKN2Q16513 984 aaKnown RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 QPCTQ16769 361 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 GLE1Q53GS7 698 aaKnown RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 ZNF662Q6ZS27 426 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 RFX8Q6ZV50 586 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 CD101Q93033 1021 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 TNIP3Q96KP6 325 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 ZNF560Q96MR9 790 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 CNPY3Q9BT09 278 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 NINJ2Q9NZG7 142 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 VANGL2Q9ULK5 521 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 TMEM120BA0PK00 339 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 C2orf71A6NGG8 1288 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 EBAG9O00559 213 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 APOL1O14791 398 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 MAPK13O15264 365 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 TRUB2O95900 331 aaKnown RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 PFKMP08237 780 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 KRT7P08729 469 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 LSP1P33241 339 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 ELK3P41970 407 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 APLP1P51693 650 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 HDAC4P56524 1084 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 FKBP1BP68106 108 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 SLC6A3Q01959 620 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 DUSP4Q13115 394 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 LPIN1Q14693 890 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 NOMO1Q15155 1222 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 SV2CQ496J9 727 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 NOMO2Q5JPE7 1267 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 ZNF697Q5TEC3 545 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 METTL23Q86XA0 190 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 PCDH19Q8TAB3 1148 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 FGFR1OP2Q9NVK5 253 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 FAM8A1Q9UBU6 413 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 RIPK2O43353 540 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 XPOTO43592 962 aaKnown RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 KIAA0754O94854 1291 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 TMEM63AO94886 807 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 JCHAINP01591 159 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 MYBL1P10243 752 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 HSPA6P17066 643 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 WEE1P30291 646 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 AP3M2P53677 418 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 VCPP55072 806 aaKnown RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 YWHAZP63104 245 aaKnown RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 DNAJC3Q13217 504 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 SIX1Q15475 284 aaPredicted RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 ZNF677Q86XU0 584 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 RNF139Q8WU17 664 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 AZIN2Q96A70 460 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 TKTL2Q9H0I9 626 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 PABPC3Q9H361 631 aaKnown RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 PIGVQ9NUD9 493 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.68□□□□□ -0.7
RFFL-212ENST00000584655 TCP11X1B4DZS4 312 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 DNAJC6O75061 913 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 TUBBP07437 444 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 YWHAHQ04917 246 aaPredicted RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 SLMAPQ14BN4 828 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 MAP7D3Q8IWC1 876 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 MPP5Q8N3R9 675 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 RASGEF1CQ8N431 466 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 EXD1Q8NHP7 514 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 CABS1Q96KC9 395 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 CALR3Q96L12 384 aaKnown RBP10.68□□□□□ -0.7
RFFL-212ENST00000584655 KLHL5Q96PQ7 755 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 SLCO1B3Q9NPD5 702 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 ACTL7AQ9Y615 435 aa10.68□□□□□ -0.7
RFFL-212ENST00000584655 FSCN2O14926 492 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 CD4P01730 458 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 SLC1A1P43005 524 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 BST2Q10589 180 aaKnown RBP10.67□□□□□ -0.7
RFFL-212ENST00000584655 BTBD8Q5XKL5 378 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 HEATR6Q6AI08 1181 aaKnown RBP10.67□□□□□ -0.7
RFFL-212ENST00000584655 OR10T2Q8NGX3 314 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 FBF1Q8TES7 1133 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 FAM81BQ96LP2 452 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 NENFQ9UMX5 172 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 C2CD2Q9Y426 696 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 KBTBD13C9JR72 458 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 GPR182O15218 404 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 GBP2P32456 591 aaPredicted RBP10.67□□□□□ -0.7
RFFL-212ENST00000584655 DHX34Q14147 1143 aaKnown RBP10.67□□□□□ -0.7
RFFL-212ENST00000584655 CTXN3Q4LDR2 81 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 CACUL1Q86Y37 369 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 IGDCC3Q8IVU1 814 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 PDIK1LQ8N165 341 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 ZNF512Q96ME7 567 aaPredicted RBP10.67□□□□□ -0.7
RFFL-212ENST00000584655 TMEM59LQ9UK28 342 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 STK38LQ9Y2H1 464 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 KIF3CO14782 793 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 AXIN1O15169 862 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 BCAT1P54687 386 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 TPI1P60174 286 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 TAF2Q6P1X5 1199 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 FAM35AQ86V20 835 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 IPMKQ8NFU5 416 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 GRK7Q8WTQ7 553 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 RSPH1Q8WYR4 309 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms