RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 NCAM1P13591 858 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 PFKLP17858 780 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 CD6P30203 668 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 EIF2S3P41091 472 aaKnown RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 SEMG2Q02383 582 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 POSTNQ15063 836 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 KMT5BQ4FZB7 885 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 TDRD10Q5VZ19 366 aaKnown RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 DHRS13Q6UX07 377 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 HS2ST1Q7LGA3 356 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 FMR1NBQ8N0W7 255 aaPredicted RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 TOP6BLQ8N6T0 577 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 BAHD1Q8TBE0 780 aaPredicted RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 KCNN1Q92952 543 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 WBP2Q969T9 261 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 SAAL1Q96ER3 474 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 FCRL3Q96P31 734 aaPredicted RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 IPO9Q96P70 1041 aaKnown RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 PRORYQ9H606 182 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 CD248Q9HCU0 757 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 SPHK2Q9NRA0 654 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 DNAJC17Q9NVM6 304 aaKnown RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 CHORDC1Q9UHD1 332 aaPredicted RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 ZNF462Q96JM2 2506 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 MUC22E2RYF6 1773 aaPredicted RBP10.81□□□□□ -0.68
GGA3-219ENST00000584550 A0A1B0GVT2 93 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 E2F8A0AVK6 867 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 PRRT4C9JH25 899 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 NEDD8-MDP1E9PL57 170 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 FLRT2O43155 660 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 HOXC11O43248 304 aaPredicted RBP10.81□□□□□ -0.68
GGA3-219ENST00000584550 COCHO43405 550 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 KLRC4O43908 158 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 DKK1O94907 266 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 HLA-EP13747 358 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 ADSSP30520 456 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 PPP3CCP48454 512 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 CSNK1EP49674 416 aaKnown RBP10.81□□□□□ -0.68
GGA3-219ENST00000584550 CACNA2D1P54289 1103 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 CLDN6P56747 220 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 MYO1EQ12965 1108 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 PREPLQ4J6C6 727 aaPredicted RBP10.81□□□□□ -0.68
GGA3-219ENST00000584550 MDH1BQ5I0G3 518 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 GRAMD4Q6IC98 578 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 VSTM1Q6UX27 236 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 LRRC69Q6ZNQ3 347 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 DDX42Q86XP3 938 aaKnown RBP eCLIP10.81□□□□□ -0.68
GGA3-219ENST00000584550 NT5DC4Q86YG4 428 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 KIAA1958Q8N8K9 716 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 CACTINQ8WUQ7 758 aaKnown RBP10.81□□□□□ -0.68
GGA3-219ENST00000584550 SCFD1Q8WVM8 642 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 KBTBD7Q8WVZ9 684 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 DNASE2BQ8WZ79 361 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 CCDC47Q96A33 483 aaKnown RBP10.81□□□□□ -0.68
GGA3-219ENST00000584550 CCDC34Q96HJ3 373 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 PCED1BQ96HM7 432 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 SLITRK1Q96PX8 696 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 GABRG3Q99928 467 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 CBWD1Q9BRT8 395 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 TTLL2Q9BWV7 592 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 GDAP2Q9NXN4 497 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 EHD2Q9NZN4 543 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 EIF2B4Q9UI10 523 aaKnown RBP10.81□□□□□ -0.68
GGA3-219ENST00000584550 CDH9Q9ULB4 789 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 STARD13Q9Y3M8 1113 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 STYXL1Q9Y6J8 313 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 NAV2Q8IVL1 2488 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 ATMQ13315 3056 aa10.81□□□□□ -0.68
GGA3-219ENST00000584550 KCNJ18B7U540 433 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 J3QKU1 62 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 CAPN9O14815 690 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 TRIM66O15016 1216 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 CLIC2O15247 247 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 EIF3DO15371 548 aaKnown RBP eCLIP10.8□□□□□ -0.68
GGA3-219ENST00000584550 TLX3O43711 291 aaPredicted RBP10.8□□□□□ -0.68
GGA3-219ENST00000584550 MYL1P05976 194 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 ZNF883P0CG24 379 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 HOXD13P35453 343 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 NOP14P78316 857 aaKnown RBP10.8□□□□□ -0.68
GGA3-219ENST00000584550 RBP5P82980 135 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 EHHADHQ08426 723 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 DPYDQ12882 1025 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 STK4Q13043 487 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 PNOCQ13519 176 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 SMAD1Q15797 465 aaKnown RBP10.8□□□□□ -0.68
GGA3-219ENST00000584550 IL27RAQ6UWB1 636 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 DBX2Q6ZNG2 339 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 TPGS1Q6ZTW0 290 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 EPM2AIP1Q7L775 607 aaPredicted RBP10.8□□□□□ -0.68
GGA3-219ENST00000584550 CACUL1Q86Y37 369 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 LRRC52Q8N7C0 313 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 ENGASEQ8NFI3 743 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 CXorf38Q8TB03 319 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 ZNF507Q8TCN5 953 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 SNX19Q92543 992 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 BHMTQ93088 406 aa10.8□□□□□ -0.68
GGA3-219ENST00000584550 ZFRQ96KR1 1074 aaKnown RBP10.8□□□□□ -0.68
GGA3-219ENST00000584550 MTMR12Q9C0I1 747 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms