RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	TGM2	P21980	687 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	DCAF4L1	Q3SXM0	396 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PKDCC	Q504Y2	493 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PQLC3	Q8N755	202 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ZMAT2	Q96NC0	199 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	TBCB	Q99426	244 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SNRNP25	Q9BV90	132 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SLC4A5	Q9BY07	1137 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	MYLK2	Q9H1R3	596 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SNTG2	Q9NY99	539 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CIT	O14578	2027 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	WDR91	A4D1P6	747 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	TM9SF1	O15321	606 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	WFS1	O76024	890 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	MAP3K6	O95382	1288 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ZBED1	O96006	694 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	MT-ND3	P03897	115 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ATP6V1C1	P21283	382 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ZNF200	P98182	395 aa	Predicted RBP	13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PTK7	Q13308	1070 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	KBTBD12	Q3ZCT8	623 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	OTOA	Q7RTW8	1153 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	TMEM110	Q86TL2	294 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SESTD1	Q86VW0	696 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	VSIG1	Q86XK7	387 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PCDH19	Q8TAB3	1148 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	KATNBL1	Q9H079	304 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PLEKHA5	Q9HAU0	1116 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	TXLNG	Q9NUQ3	528 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CHKB	Q9Y259	395 aa		13.73	□□□□□ -0.21
CSNK1D-222	ENST00000584377	IQANK1	A0A1B0GTG1	560 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CFAP69	A5D8W1	941 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PAPSS1	O43252	624 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SPAG6	O75602	509 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	INHBA	P08476	426 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SETSIP	P0DME0	302 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	RBL1	P28749	1068 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	TMEM62	Q0P6H9	643 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CA9	Q16790	459 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	LRRC23	Q53EV4	343 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	TMEM154	Q6P9G4	183 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SLC35F5	Q8WV83	523 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	B3GNT5	Q9BYG0	378 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	C12orf65	Q9H3J6	166 aa	Known RBP	13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ETNK1	Q9HBU6	452 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SLC17A7	Q9P2U7	560 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	TUBGCP4	Q9UGJ1	667 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	DCTN3	O75935	186 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SNAI1	O95863	264 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	POLE2	P56282	527 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	FAXC	Q5TGI0	409 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	RNF220	Q5VTB9	566 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SLC9A4	Q6AI14	798 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	OR6B3	Q8NGW1	331 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SLC44A1	Q8WWI5	657 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	RTP4	Q96DX8	246 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PCMTD2	Q9NV79	361 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	DERA	Q9Y315	318 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	NME7	Q9Y5B8	376 aa		13.72	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PCNT	O95613	3336 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	MDM4	O15151	490 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	MMP3	P08254	477 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SP100	P23497	879 aa	Predicted RBP	13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	HOXA11	P31270	313 aa	Predicted RBP	13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	HDAC4	P56524	1084 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SNX16	P57768	344 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	KLC1	Q07866	573 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	GLRA4	Q5JXX5	417 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	FYB2	Q5VWT5	728 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	USP50	Q70EL3	339 aa	Predicted RBP	13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CATSPER4	Q7RTX7	472 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	AGGF1	Q8N302	714 aa	eCLIP	13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ZC3H15	Q8WU90	426 aa	Known RBP	13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	C10orf82	Q8WW14	230 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	USP6NL	Q92738	828 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SLC10A4	Q96EP9	437 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CFAP36	Q96G28	342 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SNX27	Q96L92	541 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ZNF670	Q9BS34	389 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	KLC2	Q9H0B6	622 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SETD4	Q9NVD3	440 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	HES2	Q9Y543	173 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SCN1A	P35498	2009 aa		13.71	□□□□□ -0.21
CSNK1D-222	ENST00000584377	LPXN	O60711	386 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GABBR2	O75899	941 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	APRT	P07741	180 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SMPD1	P17405	629 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CALB2	P22676	271 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	YWHAZ	P63104	245 aa	Known RBP	13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	FAAP100	Q0VG06	881 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC27A1	Q6PCB7	646 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	C7orf31	Q8N865	590 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	BEST2	Q8NFU1	509 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	C18orf25	Q96B23	403 aa	Predicted RBP	13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	EIF2A	Q9BY44	585 aa	Known RBP	13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms