RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 PALMO75781 387 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 FTCDO95954 541 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 GLI1P08151 1106 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 ZDHHC11BP0C7U3 371 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 KRT3P12035 628 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 NCAM1P13591 858 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 CEBPBP17676 345 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 STXBP5Q5T5C0 1151 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 DAB2IPQ5VWQ8 1189 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 DCUN1D2Q6PH85 259 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 SLC26A9Q7LBE3 791 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 EMC1Q8N766 993 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 MAB21L3Q8N8X9 362 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 C3orf20Q8ND61 904 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 ZNF564Q8TBZ8 553 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-216ENST00000583804 MCEEQ96PE7 176 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 WDR24Q96S15 920 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 CYP2S1Q96SQ9 504 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 POMKQ9H5K3 350 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 CCSER2Q9H7U1 834 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 POPDC2Q9HBU9 364 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.45□□□□□ -0.58
TOP3A-216ENST00000583804 ASNSD1Q9NWL6 643 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 CLIC5Q9NZA1 410 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 DNAI1Q9UI46 699 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 NAALADL1Q9UQQ1 740 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 PATJQ8NI35 1801 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 TRAV19A0A0A6YYK7 116 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 GRID2IPA4D2P6 1211 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 GOLGA6L9A6NEM1 432 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SIGLEC16A6NMB1 481 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 CTIFO43310 598 aaKnown RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 TBX18O95935 607 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 TUBB4AP04350 444 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 CYP1A2P05177 515 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 CKMP06732 381 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 HDCP19113 662 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SP100P23497 879 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 GBP2P32456 591 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 ATP5C1P36542 298 aaKnown RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SCNN1AP37088 669 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 TFF2Q03403 129 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 MAMLD1Q13495 774 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 MESDQ14696 234 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 LEXMQ3ZCV2 418 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 DCAF6Q58WW2 860 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 C10orf120Q5SQS8 335 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SNX30Q5VWJ9 437 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 TADA2BQ86TJ2 420 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 DEFB106AQ8N104 65 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 TXLNBQ8N3L3 684 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 ARL14EPQ8N8R7 260 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 JOSD2Q8TAC2 188 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 RFFLQ8WZ73 363 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SUSD6Q92537 303 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.587e-7■■□□□ 12.3
TOP3A-216ENST00000583804 TRIM62Q9BVG3 475 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SLC46A2Q9BY10 475 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 TASP1Q9H6P5 420 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 MRPL47Q9HD33 250 aaKnown RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 ANAPC7Q9UJX3 599 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 PACSIN2Q9UNF0 486 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 USTQ9Y2C2 406 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SCINQ9Y6U3 715 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 GREB1Q4ZG55 1949 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 ENC1O14682 589 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 MDM4O15151 490 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 FANCGO15287 622 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 COCHO43405 550 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 DAB1O75553 588 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 FYNP06241 537 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 PDGFRAP16234 1089 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 DDX6P26196 483 aaKnown RBP eCLIP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 RFC1P35251 1148 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 GJC1P36383 396 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 RPL7AP62424 266 aaKnown RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 EFEMP1Q12805 493 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SYPL2Q5VXT5 272 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 PLEKHA7Q6IQ23 1121 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 PTCRAQ6ISU1 281 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 MIB1Q86YT6 1006 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 NPAS3Q8IXF0 933 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 TTC16Q8NEE8 873 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 ADAM32Q8TC27 787 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 RXFP2Q8WXD0 754 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 FGF13Q92913 245 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 ZSWIM3Q96MP5 696 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 SLC22A12Q96S37 553 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 CDK5RAP1Q96SZ6 601 aaKnown RBP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 PSMB7Q99436 277 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 RNF38Q9H0F5 515 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
TOP3A-216ENST00000583804 RASAL2Q9UJF2 1139 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 DNMT3LQ9UJW3 386 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 TMEM59LQ9UK28 342 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
TOP3A-216ENST00000583804 DOCK6Q96HP0 2047 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms