RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.41
GGA3-217ENST00000583667 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 DDX43Q9NXZ2 648 aaKnown RBP12.52□□□□□ -0.41
GGA3-217ENST00000583667 CHORDC1Q9UHD1 332 aaPredicted RBP12.52□□□□□ -0.41
GGA3-217ENST00000583667 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
GGA3-217ENST00000583667 CNOT1A5YKK6 2376 aaKnown RBP12.51□□□□□ -0.41
GGA3-217ENST00000583667 PGRMC1O00264 195 aaKnown RBP12.51□□□□□ -0.41
GGA3-217ENST00000583667 SYN3O14994 580 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 SPOPO43791 374 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 CA8P35219 290 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 RFC1P35251 1148 aaPredicted RBP12.51□□□□□ -0.41
GGA3-217ENST00000583667 SLC8A3P57103 927 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 RPL7AP62424 266 aaKnown RBP12.51□□□□□ -0.41
GGA3-217ENST00000583667 PDE4CQ08493 712 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 MAPRE1Q15691 268 aaKnown RBP12.51□□□□□ -0.41
GGA3-217ENST00000583667 C2CD6Q53TS8 623 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 DCAF12L1Q5VU92 463 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 PMF1Q6P1K2 205 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 DCUN1D2Q6PH85 259 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 POLNQ7Z5Q5 900 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 ZNF280BQ86YH2 543 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 THEM5Q8N1Q8 247 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 CAPZA3Q96KX2 299 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 PKMYT1Q99640 499 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 SYT15Q9BQS2 421 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 TRIM7Q9C029 511 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 CSNK1G1Q9HCP0 422 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 RAB21Q9UL25 225 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 INPP5FQ9Y2H2 1132 aa12.51□□□□□ -0.41
GGA3-217ENST00000583667 DSPP15924 2871 aaKnown RBP12.51□□□□□ -0.41
GGA3-217ENST00000583667 CARNS1A5YM72 827 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 DPYSL4O14531 572 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 CEP104O60308 925 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 GABBR2O75899 941 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 ALDH2P05091 517 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 SLC6A3Q01959 620 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 ZNF252P-AS1Q0IIN9 211 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 MRPL58Q14197 206 aaKnown RBP12.5□□□□□ -0.41
GGA3-217ENST00000583667 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 TSSK4Q6SA08 328 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 SLC26A9Q7LBE3 791 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 KATNAL2Q8IYT4 538 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 ABI1Q8IZP0 508 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 SCML4Q8N228 414 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 NOA1Q8NC60 698 aaKnown RBP12.5□□□□□ -0.41
GGA3-217ENST00000583667 EXD1Q8NHP7 514 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 SLC2A14Q8TDB8 520 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 AUTS2Q8WXX7 1259 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 KRT35Q92764 455 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 NXPE3Q969Y0 559 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 MS4A14Q96JA4 679 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 BTBD6Q96KE9 485 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 PSMB7Q99436 277 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 CNPY3Q9BT09 278 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 COLEC11Q9BWP8 271 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 OXCT2Q9BYC2 517 aaPredicted RBP12.5□□□□□ -0.41
GGA3-217ENST00000583667 B3GNT5Q9BYG0 378 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 SYNCQ9H7C4 482 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 SFXN1Q9H9B4 322 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 CRTAC1Q9NQ79 661 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 SEMA4GQ9NTN9 838 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 FAM49BQ9NUQ9 324 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 ASNSD1Q9NWL6 643 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 EPS15L1Q9UBC2 864 aa12.5□□□□□ -0.41
GGA3-217ENST00000583667 MTF2Q9Y483 593 aaPredicted RBP12.5□□□□□ -0.41
GGA3-217ENST00000583667 IGF2RP11717 2491 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 C2CD4BA6NLJ0 364 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 SRRM3A6NNA2 597 aaPredicted RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 E5RJQ4 531 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 TM4SF5O14894 197 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 B4GALT3O60512 393 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 LRP3O75074 770 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 ATP2C2O75185 946 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 EFEMP2O95967 443 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 GLI1P08151 1106 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 CCDC130P13994 396 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 H2AFXP16104 143 aaPredicted RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 MCM3P25205 808 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 GBP2P32456 591 aaPredicted RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 PCK1P35558 622 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 BRCC3P46736 316 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 ZNF143P52747 638 aaPredicted RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 COPS2P61201 443 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 OGDHQ02218 1023 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 NAA30Q147X3 362 aaPredicted RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 LPAL2Q16609 132 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 INTS6LQ5JSJ4 861 aaKnown RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 CYP4A22Q5TCH4 519 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 LAIR1Q6GTX8 287 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 CC2D1AQ6P1N0 951 aaPredicted RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 OLFML1Q6UWY5 402 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 PRR23CQ6ZRP0 262 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 SLC39A11Q8N1S5 342 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 MAIP1Q8WWC4 291 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 SHDQ96IW2 340 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 MCEEQ96PE7 176 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 FAM193BQ96PV7 902 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms