RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 IRF1P10914 325 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 GLDCP23378 1020 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 CD27P26842 260 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 ARRB1P49407 418 aaPredicted RBP11.78□□□□□ -0.52
CASC3-208ENST00000583649 BNC1Q01954 994 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 SFSWAPQ12872 951 aaKnown RBP11.78□□□□□ -0.52
CASC3-208ENST00000583649 ARHGAP40Q5TG30 622 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 TPGS1Q6ZTW0 290 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 HTR3DQ70Z44 454 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 GPBP1Q86WP2 473 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 FMNL3Q8IVF7 1028 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 FAM184AQ8NB25 1140 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 RASSF8Q8NHQ8 419 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 HPDLQ96IR7 371 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 MKRN2Q9H000 416 aaKnown RBP11.78□□□□□ -0.52
CASC3-208ENST00000583649 BTBD1Q9H0C5 482 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 TM9SF3Q9HD45 589 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 COMMD8Q9NX08 183 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.78□□□□□ -0.52
CASC3-208ENST00000583649 PTPRJQ12913 1337 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 ANAPC1Q9H1A4 1944 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 TENM4Q6N022 2769 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 NPHP3-ACAD11A0A0J9YXS1 232 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 WASH3PC4AMC7 463 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 ANKRD63C9JTQ0 380 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 H0Y8X5 98 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 TIMM44O43615 452 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 JAK2O60674 1132 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
CASC3-208ENST00000583649 ADSSP30520 456 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 GNL1P36915 607 aaPredicted RBP11.77□□□□□ -0.53
CASC3-208ENST00000583649 ZNF131P52739 623 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 E2F1Q01094 437 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 EIF4HQ15056 248 aaKnown RBP11.77□□□□□ -0.53
CASC3-208ENST00000583649 ME3Q16798 604 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 HS1BP3Q53T59 392 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 MDH1BQ5I0G3 518 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 SNX30Q5VWJ9 437 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 SLC39A4Q6P5W5 647 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 PCSK4Q6UW60 755 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 USP49Q70CQ1 688 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 FAM124AQ86V42 546 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 OSTM1Q86WC4 334 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
CASC3-208ENST00000583649 C1orf216Q8TAB5 229 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 PLIN2Q99541 437 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 DPH1Q9BZG8 443 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 FBRSQ9HAH7 460 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 CHORDC1Q9UHD1 332 aaPredicted RBP11.77□□□□□ -0.53
CASC3-208ENST00000583649 IL17BQ9UHF5 180 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 HCN2Q9UL51 889 aa11.77□□□□□ -0.53
CASC3-208ENST00000583649 MUC22E2RYF6 1773 aaPredicted RBP11.77□□□□□ -0.53
CASC3-208ENST00000583649 MYH11P35749 1972 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 A0A1B0GTQ1 180 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 KCNJ18B7U540 433 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 TRIM24O15164 1050 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 SEMA4FO95754 770 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 CYBBP04839 570 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 FAM163BP0C2L3 166 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 TRIM21P19474 475 aaKnown RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 LMO2P25791 158 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 CHKAP35790 457 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 CTSKP43235 329 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 ANAPC15P60006 121 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 RACK1P63244 317 aaKnown RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 IL9RQ01113 521 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 ZBTB16Q05516 673 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 SRSF1Q07955 248 aaKnown RBP eCLIP11.76□□□□□ -0.53
CASC3-208ENST00000583649 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 DHX8Q14562 1220 aaKnown RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 SURF1Q15526 300 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 TTC31Q49AM3 519 aaPredicted RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 SLC45A4Q5BKX6 768 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 ARSHQ5FYA8 562 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 FBXL19Q6PCT2 694 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 SERPINA13PQ6UXR4 307 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 TADA2BQ86TJ2 420 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 BRSK2Q8IWQ3 736 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 OXR1Q8N573 874 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 FBXO18Q8NFZ0 1043 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 OR6B3Q8NGW1 331 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 KCNE4Q8WWG9 221 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 CCDC97Q96F63 343 aaPredicted RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 AK8Q96MA6 479 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 ELF4Q99607 663 aaPredicted RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 MMTAG2Q9BU76 263 aaKnown RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 LHX5Q9H2C1 402 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 ST6GALNAC4Q9H4F1 302 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 FBXO44Q9H4M3 255 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 SGK2Q9HBY8 427 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 CRTAC1Q9NQ79 661 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 TLR8Q9NR97 1041 aaKnown RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 THAP10Q9P2Z0 257 aaPredicted RBP11.76□□□□□ -0.53
CASC3-208ENST00000583649 SEPT3Q9UH03 358 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 ADAMTS1Q9UHI8 967 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 NCKAP1Q9Y2A7 1128 aa11.76□□□□□ -0.53
CASC3-208ENST00000583649 ZNF510Q9Y2H8 683 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms