RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ACADSBP45954 432 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 BPIFB4P59827 614 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 POLR2FP61218 127 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 COG7P83436 770 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 DHCR24Q15392 516 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 SKOR2Q2VWA4 1001 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 DGKKQ5KSL6 1271 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 NAIF1Q69YI7 327 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 SMYD5Q6GMV2 418 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 HTR3DQ70Z44 454 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 SCML4Q8N228 414 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 CLEC4CQ8WTT0 213 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 IRGQQ8WZA9 623 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 ATOH1Q92858 354 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 CD101Q93033 1021 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 OTUB2Q96DC9 234 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 FAM122AQ96E09 287 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 P2RY13Q9BPV8 354 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 NAA15Q9BXJ9 866 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 STK33Q9BYT3 514 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 GANQ9H2C0 597 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 PDCL3Q9H2J4 239 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 CHRDQ9H2X0 955 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 ABCC13Q9NSE7 274 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 FAM86C1Q9NVL1 165 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 CEP83Q9Y592 693 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 E5RJQ4 531 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 F8VZ95 297 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 TRDMT1O14717 391 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 STC2O76061 302 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 LTFP02788 710 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 ADH5P11766 374 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 GALK1P51570 392 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 NHLH1Q02575 133 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 MTAPQ13126 283 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 PDCLQ13371 301 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 CCINQ13939 588 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 TMEM196Q5HYL7 178 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 LY6G5CQ5SRR4 150 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 FSTL4Q6MZW2 842 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 RHBDF2Q6PJF5 856 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 Q6ZS52 159 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 APTXQ7Z2E3 356 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 SCUBE3Q8IX30 993 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 STK32AQ8WU08 396 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 FAM149B1Q96BN6 582 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 SLC4A5Q9BY07 1137 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 FBRSL1Q9HCM7 1045 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 NLRC4Q9NPP4 1024 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 SPHK2Q9NRA0 654 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 CYTH4Q9UIA0 394 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
SMARCE1-218ENST00000582955 LRRC10BA6NIK2 292 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 SART1O43290 800 aaKnown RBP13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 GREM1O60565 184 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 GFPT2O94808 682 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 EGFP01133 1207 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 CYP11B1P15538 503 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 DRD1P21728 446 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 TPM4P67936 248 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 GAD2Q05329 585 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 ANO4Q32M45 955 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 ZSCAN23Q3MJ62 389 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 FILIP1LQ4L180 1135 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 TAF3Q5VWG9 929 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 FMNL3Q8IVF7 1028 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 C1orf131Q8NDD1 294 aaKnown RBP13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 NOX5Q96PH1 765 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 SPAG5Q96R06 1193 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 IER2Q9BTL4 223 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 DCLK3Q9C098 648 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 LHX5Q9H2C1 402 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 SYNCQ9H7C4 482 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 SFMBT1Q9UHJ3 866 aa13.18□□□□□ -0.3
SMARCE1-218ENST00000582955 CAPN9O14815 690 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 EPHB6O15197 1021 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 PAPSS1O43252 624 aaPredicted RBP13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 NCAM1P13591 858 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 PLA2G5P39877 138 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 OPRD1P41143 372 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 RPL34P49207 117 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 CSTF1Q05048 431 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 GAS6Q14393 721 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 IQCB1Q15051 598 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 GAB4Q2WGN9 574 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 Q6ZNB5 142 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 TMEM110Q86TL2 294 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 TMEM25Q86YD3 366 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 DENND1CQ8IV53 801 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 SYNPOQ8N3V7 929 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 WDTC1Q8N5D0 677 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 NAT16Q8N8M0 369 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 IPO4Q8TEX9 1081 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 PPP1R13BQ96KQ4 1090 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms