RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PTPN5P54829 565 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 UBXN1Q04323 297 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 NR1I3Q14994 352 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 UBXN2BQ14CS0 331 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 SYCP1Q15431 976 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 TRIP4Q15650 581 aaPredicted RBP13.23□□□□□ -0.29
SNORD55-201ENST00000581525 BTBD8Q5XKL5 378 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 C1orf210Q8IVY1 113 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 SCUBE3Q8IX30 993 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 FAM217AQ8IXS0 508 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 MAML2Q8IZL2 1156 aaPredicted RBP13.23□□□□□ -0.29
SNORD55-201ENST00000581525 SIX6OS1Q8N1H7 587 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 NELL1Q92832 810 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 LMAN1LQ9HAT1 526 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 CBX8Q9HC52 389 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 FBRSL1Q9HCM7 1045 aaKnown RBP13.23□□□□□ -0.29
SNORD55-201ENST00000581525 SPHK2Q9NRA0 654 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 ASNSD1Q9NWL6 643 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 MARK1Q9P0L2 795 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 RAPGEFL1Q9UHV5 662 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 STOML2Q9UJZ1 356 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 FBXO10Q9UK96 956 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 NUDT5Q9UKK9 219 aa13.23□□□□□ -0.29
SNORD55-201ENST00000581525 HBS1LQ9Y450 684 aaKnown RBP13.23□□□□□ -0.29
SNORD55-201ENST00000581525 CACNA1HO95180 2353 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 A0A1W2PQC6 194 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 GFRA2O00451 464 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 MDM4O15151 490 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 TEX33O43247 280 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 HOXC11O43248 304 aaPredicted RBP13.22□□□□□ -0.29
SNORD55-201ENST00000581525 IGLV3-27P01718 113 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 LTFP02788 710 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 PNMA6AP0CW24 399 aaPredicted RBP13.22□□□□□ -0.29
SNORD55-201ENST00000581525 LCP1P13796 627 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 DRD1P21728 446 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 KRT9P35527 623 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 POLR2FP61218 127 aaKnown RBP13.22□□□□□ -0.29
SNORD55-201ENST00000581525 GOLGA8FQ08AF8 430 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 GOLGA8DPQ0D2H9 430 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 PDCLQ13371 301 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 RAPGEF1Q13905 1077 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 GAS6Q14393 721 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 ZNF528Q3MIS6 628 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 FSTL4Q6MZW2 842 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 BBS7Q8IWZ6 715 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 EPS8L1Q8TE68 723 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 CLEC4CQ8WTT0 213 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 EXOC4Q96A65 974 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 AZIN2Q96A70 460 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 NAP1L5Q96NT1 182 aaPredicted RBP13.22□□□□□ -0.29
SNORD55-201ENST00000581525 MARCH2Q9P0N8 246 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 NOCTQ9UK39 431 aaKnown RBP13.22□□□□□ -0.29
SNORD55-201ENST00000581525 FBXO4Q9UKT5 387 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 MYO6Q9UM54 1294 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 SH3BP1Q9Y3L3 701 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 DMDP11532 3685 aa13.22□□□□□ -0.29
SNORD55-201ENST00000581525 VPS13AQ96RL7 3174 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 CHURC1-FNTBB4DL54 471 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 E5RJQ4 531 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 LATS1O95835 1130 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
SNORD55-201ENST00000581525 SOX5P35711 763 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 SCNN1AP37088 669 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 USP8P40818 1118 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 GAD2Q05329 585 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 RING1Q06587 406 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 EFEMP1Q12805 493 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 NNTQ13423 1086 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 LRRC32Q14392 662 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 PON2Q15165 354 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 FBXO43Q4G163 708 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 PHTF2Q8N3S3 785 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 CPXM2Q8N436 756 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 ZNF397Q8NF99 534 aaPredicted RBP13.21□□□□□ -0.29
SNORD55-201ENST00000581525 TTC8Q8TAM2 541 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 EZH1Q92800 747 aaPredicted RBP13.21□□□□□ -0.29
SNORD55-201ENST00000581525 CD101Q93033 1021 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 PLD4Q96BZ4 506 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 PPP1R13BQ96KQ4 1090 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 CPXM1Q96SM3 734 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.29
SNORD55-201ENST00000581525 NACA2Q9H009 215 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 FAM207AQ9NSI2 230 aaPredicted RBP13.21□□□□□ -0.29
SNORD55-201ENST00000581525 LSM7Q9UK45 103 aaKnown RBP13.21□□□□□ -0.29
SNORD55-201ENST00000581525 STRIP2Q9ULQ0 834 aa13.21□□□□□ -0.29
SNORD55-201ENST00000581525 NDRG2Q9UN36 371 aaKnown RBP13.21□□□□□ -0.29
SNORD55-201ENST00000581525 MYO15AQ9UKN7 3530 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 PROB1E7EW31 1015 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 LSM8O95777 96 aaKnown RBP13.2□□□□□ -0.3
SNORD55-201ENST00000581525 ADH1CP00326 375 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 IGLV3-25P01717 112 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 CYP1A1P04798 512 aaPredicted RBP13.2□□□□□ -0.3
SNORD55-201ENST00000581525 TDGF1P13385 188 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 CHRNB2P17787 502 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 HOXA6P31267 233 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 PBX1P40424 430 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 STAT1P42224 750 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 SNX16P57768 344 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms