RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
RFFL-208ENST00000581039 CYP24A1Q07973 514 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 SUZ12Q15022 739 aaKnown RBP10.49□□□□□ -0.73
RFFL-208ENST00000581039 HLA-BQ31612 363 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 DCAF12L1Q5VU92 463 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 PAQR9Q6ZVX9 377 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 TMPRSS7Q7RTY8 843 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 ZCCHC9Q8N567 271 aaKnown RBP10.49□□□□□ -0.73
RFFL-208ENST00000581039 XXYLT1Q8NBI6 393 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 GLIS3Q8NEA6 775 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 ZNF507Q8TCN5 953 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 BHMTQ93088 406 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 HPS3Q969F9 1004 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 CDC6Q99741 560 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 IL21RQ9HBE5 538 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 AGPAT3Q9NRZ7 376 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 TM7SF3Q9NS93 570 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 KRT82Q9NSB4 513 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 WSB2Q9NYS7 404 aaPredicted RBP10.49□□□□□ -0.73
RFFL-208ENST00000581039 STON1Q9Y6Q2 735 aa10.49□□□□□ -0.73
RFFL-208ENST00000581039 CEP192Q8TEP8 1941 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 IGSF10Q6WRI0 2623 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 GOLGA8CPA6NN73 597 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 METTL12A8MUP2 240 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 NPC1O15118 1278 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 CLIC2O15247 247 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 EIF3DO15371 548 aaKnown RBP eCLIP10.48□□□□□ -0.73
RFFL-208ENST00000581039 SYNCRIPO60506 623 aaKnown RBP10.48□□□□□ -0.73
RFFL-208ENST00000581039 CILPO75339 1184 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 ATXN1LP0C7T5 689 aaKnown RBP10.48□□□□□ -0.73
RFFL-208ENST00000581039 PLA2G4AP47712 749 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 PGFP49763 221 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 TPMTP51580 245 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 MAP3K7CLP57077 242 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 SNRPFP62306 86 aaKnown RBP10.48□□□□□ -0.73
RFFL-208ENST00000581039 CYP4F3Q08477 520 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 BIRC3Q13489 604 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 FUT11Q495W5 492 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 ZNF667Q5HYK9 610 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 ACOT1Q86TX2 421 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 TMPRSS6Q8IU80 811 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 FUKQ8N0W3 1084 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 GALNT15Q8N3T1 639 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 PDILTQ8N807 584 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 UCMAQ8WVF2 138 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 SMOQ99835 787 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 NUP58Q9BVL2 599 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 XYLT2Q9H1B5 865 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 SMYD3Q9H7B4 428 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 CYLDQ9NQC7 956 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 PLK2Q9NYY3 685 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 USP36Q9P275 1121 aaKnown RBP10.48□□□□□ -0.73
RFFL-208ENST00000581039 DKK4Q9UBT3 224 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 APC2O95996 2303 aa10.48□□□□□ -0.73
RFFL-208ENST00000581039 URB1O60287 2271 aaKnown RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 A0A087X0B3 334 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 TRABD2BA6NFA1 517 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 FLRT2O43155 660 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 TGFB1I1O43294 461 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 BEST1O76090 585 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 CD2BP2O95400 341 aaKnown RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 ACADMP11310 421 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 PDCP20941 246 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 AP3M2P53677 418 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 AMPD3Q01432 767 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 E2F5Q15329 346 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 ZNF699Q32M78 642 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 DBX2Q6ZNG2 339 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 TADA2BQ86TJ2 420 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 ZMIZ2Q8NF64 920 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 SLC2A14Q8TDB8 520 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 PRCCQ92733 491 aaPredicted RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 SIPA1Q96FS4 1042 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 BBC3Q96PG8 261 aaPredicted RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 TRIM9Q9C026 710 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 MKRN2Q9H000 416 aaKnown RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 TNMDQ9H2S6 317 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 VRTNQ9H8Y1 702 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 CSNK1G1Q9HCP0 422 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 THAP10Q9P2Z0 257 aaPredicted RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 EIF2B4Q9UI10 523 aaKnown RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 DNMT3LQ9UJW3 386 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 FBXO10Q9UK96 956 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 FNDC3AQ9Y2H6 1198 aaKnown RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 SLC27A6Q9Y2P4 619 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 PCDHGB2Q9Y5G2 931 aa10.47□□□□□ -0.73
RFFL-208ENST00000581039 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
RFFL-208ENST00000581039 ASXL3Q9C0F0 2248 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 A0A1B0GVT2 93 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 KCNJ18B7U540 433 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 EXOC3O60645 756 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 RARGP13631 454 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 P4HA1P13674 534 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 CCDC130P13994 396 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 TRIM21P19474 475 aaKnown RBP10.46□□□□□ -0.73
RFFL-208ENST00000581039 ACO1P21399 889 aaKnown RBP10.46□□□□□ -0.73
RFFL-208ENST00000581039 CHKAP35790 457 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 IL12RB1P42701 662 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 CSNK1EP49674 416 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms