RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TMCO5BA8MYB1 307 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 PJA2O43164 708 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 MBTPS2O43462 519 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 TLR5O60602 858 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 IGLV3-25P01717 112 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 FYNP06241 537 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 KRT3P12035 628 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 KCNA5P22460 613 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 FSHRP23945 695 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 MATKP42679 507 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 MAGEA1P43355 309 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 PTPN9P43378 593 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 KPNA1P52294 538 aaPredicted RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 VAV2P52735 878 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 SLC7A9P82251 487 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 IFRD2Q12894 506 aaPredicted RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 MTA1Q13330 715 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 MAMLD1Q13495 774 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 ACAP1Q15027 740 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 SKIV2LQ15477 1246 aaKnown RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 SMAD2Q15796 467 aaKnown RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 CCDC85BQ15834 202 aaPredicted RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 AAK1Q2M2I8 961 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 SLC5A9Q2M3M2 681 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 HS1BP3Q53T59 392 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 BTBD8Q5XKL5 378 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 BNIPLQ7Z465 357 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 ZNF454Q8N9F8 522 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 CLEC4CQ8WTT0 213 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 UBE2Q2Q8WVN8 375 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 RFFLQ8WZ73 363 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 FAM149B1Q96BN6 582 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 PIWIL1Q96J94 861 aaKnown RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 NCAPGQ9BPX3 1015 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 DDX23Q9BUQ8 820 aaKnown RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 SELENOOQ9BVL4 669 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 THAP2Q9H0W7 228 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 ATXN3LQ9H3M9 355 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 SMOC2Q9H3U7 446 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 KIF9Q9HAQ2 790 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 NMUR1Q9HB89 426 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 TRPV4Q9HBA0 871 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 OSER1Q9NX31 292 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 CNOT8Q9UFF9 292 aaKnown RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 STAP1Q9ULZ2 295 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 USP15Q9Y4E8 981 aaPredicted RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 PCDHA13Q9Y5I0 950 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 COL6A3P12111 3177 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 TRAV19A0A0A6YYK7 116 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 C2CD4BA6NLJ0 364 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 DPYSL4O14531 572 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 ENDOD1O94919 500 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 CCDC175P0C221 793 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 MYL4P12829 197 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 RARGP13631 454 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 DESP17661 470 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 ATP5C1P36542 298 aaKnown RBP10.87□□□□□ -0.67
CCDC47-203ENST00000580986 PTPN5P54829 565 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 RING1Q06587 406 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 EIF4EBP2Q13542 120 aaPredicted RBP10.87□□□□□ -0.67
CCDC47-203ENST00000580986 MTF1Q14872 753 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 SLC25A52Q3SY17 297 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 HFE2Q6ZVN8 426 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 STRADAQ7RTN6 431 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 OTOP3Q7RTS5 596 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 DDX42Q86XP3 938 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCDC47-203ENST00000580986 NPAS3Q8IXF0 933 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 CMTM8Q8IZV2 173 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 NIPA2Q8N8Q9 360 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 SERPINB11Q96P15 392 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 TSGA10Q9BZW7 698 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 KCNF1Q9H3M0 494 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 POMKQ9H5K3 350 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 METTL5Q9NRN9 209 aaKnown RBP10.87□□□□□ -0.67
CCDC47-203ENST00000580986 OBP2AQ9NY56 170 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCDC47-203ENST00000580986 CHORDC1Q9UHD1 332 aaPredicted RBP10.87□□□□□ -0.67
CCDC47-203ENST00000580986 DNMT3LQ9UJW3 386 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 CDH7Q9ULB5 785 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 ARHGAP26Q9UNA1 814 aa10.87□□□□□ -0.67
CCDC47-203ENST00000580986 REXO2Q9Y3B8 237 aaKnown RBP10.87□□□□□ -0.67
CCDC47-203ENST00000580986 HBS1LQ9Y450 684 aaKnown RBP10.87□□□□□ -0.67
CCDC47-203ENST00000580986 DOCK8Q8NF50 2099 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 DOCK6Q96HP0 2047 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 GRXCR2A6NFK2 248 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 TMEM191CA6NGB0 347 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 H3BQ06 376 aaPredicted RBP10.86□□□□□ -0.67
CCDC47-203ENST00000580986 PIK3R2O00459 728 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 CAPN9O14815 690 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 COCHO43405 550 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 F9P00740 461 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 NCAM1P13591 858 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 CEBPBP17676 345 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 ABCB4P21439 1286 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 RFC1P35251 1148 aaPredicted RBP10.86□□□□□ -0.67
CCDC47-203ENST00000580986 FLT3P36888 993 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 ARHGAP25P42331 645 aa10.86□□□□□ -0.67
CCDC47-203ENST00000580986 PGFP49763 221 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms