RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 KPNA1P52294 538 aaPredicted RBP16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 GSCP56915 257 aaPredicted RBP16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 RNASE9P60153 205 aaKnown RBP16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 TAF5Q15542 800 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 SLC18A3Q16572 532 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 CCDC122Q5T0U0 273 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 FAM102AQ5T9C2 384 aaPredicted RBP16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 CC2D1AQ6P1N0 951 aaPredicted RBP16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 MSANTD2Q6P1R3 559 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 ALKBH5Q6P6C2 394 aaKnown RBP16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 PHLDB2Q86SQ0 1253 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 MIB1Q86YT6 1006 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 RNF135Q8IUD6 432 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 DEFB106AQ8N104 65 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 SH3RF2Q8TEC5 729 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 KHSRPQ92945 711 aaKnown RBP eCLIP16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 TRIM11Q96F44 468 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 SLC2A13Q96QE2 648 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 RPP25Q9BUL9 199 aaKnown RBP16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 SELENOOQ9BVL4 669 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 PLA2G2FQ9BZM2 168 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 GKN1Q9NS71 199 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 SMPD4Q9NXE4 827 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 MARCH2Q9P0N8 246 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 CCL26Q9Y258 94 aa16.27■□□□□ 0.2
SLC6A4-205ENST00000579221 SLC12A8A0AV02 714 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 MDM4O15151 490 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 ASGR2P07307 311 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 MYBL1P10243 752 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 PSMC3P17980 439 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 NOS2P35228 1153 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 GSDMDP57764 484 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 TDGQ13569 410 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 ASTE1Q2TB18 679 aaPredicted RBP16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 DCAF6Q58WW2 860 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 VITQ6UXI7 678 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 ARCQ7LC44 396 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 TMTC1Q8IUR5 882 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 KIAA1958Q8N8K9 716 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 PIWIL1Q96J94 861 aaKnown RBP16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 NECAB3Q96P71 396 aaPredicted RBP16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 TRMT61BQ9BVS5 477 aaKnown RBP16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 RRN3Q9NYV6 651 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 SFMBT1Q9UHJ3 866 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 SH3BP1Q9Y3L3 701 aa16.26■□□□□ 0.19
SLC6A4-205ENST00000579221 E2F8A0AVK6 867 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 SIGLEC16A6NMB1 481 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 DAB1O75553 588 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 KRT3P12035 628 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 GBP1P32455 592 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 MATKP42679 507 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 ZXDBP98169 803 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 GFPT1Q06210 699 aaPredicted RBP16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 ARHGAP29Q52LW3 1261 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 DNAJC24Q6P3W2 148 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 CCDC170Q8IYT3 715 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 C3orf20Q8ND61 904 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 RSPRY1Q96DX4 576 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 ZFRQ96KR1 1074 aaKnown RBP16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 LRRC3BQ96PB8 259 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 CD320Q9NPF0 282 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 METTL5Q9NRN9 209 aaKnown RBP16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 PARVAQ9NVD7 372 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 TMEM51Q9NW97 253 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 CFAP97Q9P2B7 532 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 TMEM59LQ9UK28 342 aa16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 LSM7Q9UK45 103 aaKnown RBP16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 HBS1LQ9Y450 684 aaKnown RBP16.25■□□□□ 0.19
SLC6A4-205ENST00000579221 ZNF638Q14966 1978 aaKnown RBP16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 ANKRD62A6NC57 917 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 ZNF263O14978 683 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 HMBSP08397 361 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 IRF1P10914 325 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 RRM1P23921 792 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 USP4Q13107 963 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 GRM2Q14416 872 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 MTF1Q14872 753 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 ZNF77Q15935 545 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 DNAAF5Q86Y56 855 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 DQX1Q8TE96 717 aaKnown RBP16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 SERPINB11Q96P15 392 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 DDX23Q9BUQ8 820 aaKnown RBP16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 DCLK3Q9C098 648 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 SMOC2Q9H3U7 446 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 TBC1D14Q9P2M4 693 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 CNOT8Q9UFF9 292 aaKnown RBP16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 STAP1Q9ULZ2 295 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 SORCS3Q9UPU3 1222 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 EYSQ5T1H1 3165 aa16.24■□□□□ 0.19
SLC6A4-205ENST00000579221 SLC9A3R1O14745 358 aaPredicted RBP16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 CHADO15335 359 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 TRUB2O95900 331 aaKnown RBP16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 F9P00740 461 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 FECHP22830 423 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 GDI1P31150 447 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 CYLC1P35663 651 aaPredicted RBP16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 TBX4P57082 545 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms