RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 E7ENQ6 273 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 ATG13O75143 517 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 EGFP01133 1207 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 SP9P0CG40 484 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 GPD2P43304 727 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 CXCL12P48061 93 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 SNX16P57768 344 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 UBXN1Q04323 297 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 CCINQ13939 588 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 LY6G5CQ5SRR4 150 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 SMYD5Q6GMV2 418 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 FSTL4Q6MZW2 842 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 RHBDF2Q6PJF5 856 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 ZC3H14Q6PJT7 736 aaKnown RBP18.31■□□□□ 0.52
ITGB4-205ENST00000579211 SCUBE3Q8IX30 993 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 SCML4Q8N228 414 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 SPEM1Q8N4L4 309 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 CCDC26Q8TAB7 109 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 WBP2Q969T9 261 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 SPHK2Q9NRA0 654 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 LIMA1Q9UHB6 759 aaKnown RBP18.31■□□□□ 0.52
ITGB4-205ENST00000579211 AJAP1Q9UKB5 411 aaPredicted RBP18.31■□□□□ 0.52
ITGB4-205ENST00000579211 FBXO4Q9UKT5 387 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 FHOD1Q9Y613 1164 aa18.31■□□□□ 0.52
ITGB4-205ENST00000579211 SYCE3A1L190 88 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 CAPN9O14815 690 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 SART1O43290 800 aaKnown RBP18.3■□□□□ 0.52
ITGB4-205ENST00000579211 LTFP02788 710 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 APODP05090 189 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 UCHL3P15374 230 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 CLCN1P35523 988 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 MEA1Q16626 185 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 SKOR2Q2VWA4 1001 aaPredicted RBP18.3■□□□□ 0.52
ITGB4-205ENST00000579211 FBXO43Q4G163 708 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 PREPLQ4J6C6 727 aaPredicted RBP18.3■□□□□ 0.52
ITGB4-205ENST00000579211 TPGS1Q6ZTW0 290 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 NUDT18Q6ZVK8 323 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 PASD1Q8IV76 773 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 FMNL3Q8IVF7 1028 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 NAT16Q8N8M0 369 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 FAM149B1Q96BN6 582 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 PNKPQ96T60 521 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 BPIFA3Q9BQP9 254 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 STK33Q9BYT3 514 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 SYNCQ9H7C4 482 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 PLCB1Q9NQ66 1216 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 FAM207AQ9NSI2 230 aaPredicted RBP18.3■□□□□ 0.52
ITGB4-205ENST00000579211 SFMBT1Q9UHJ3 866 aa18.3■□□□□ 0.52
ITGB4-205ENST00000579211 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.29■□□□□ 0.52
ITGB4-205ENST00000579211 RNF40O75150 1001 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 STC2O76061 302 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 PNMA6AP0CW24 399 aaPredicted RBP18.29■□□□□ 0.52
ITGB4-205ENST00000579211 NCAM1P13591 858 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 CORO1AP31146 461 aaKnown RBP18.29■□□□□ 0.52
ITGB4-205ENST00000579211 SLC6A11P48066 632 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 HARS2P49590 506 aaKnown RBP18.29■□□□□ 0.52
ITGB4-205ENST00000579211 ZNF165P49910 485 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 NRLP54845 237 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 TPM4P67936 248 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 FILIP1LQ4L180 1135 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 TSSK4Q6SA08 328 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 Q6ZS52 159 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 SLC47A2Q86VL8 602 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 FAM71AQ8IYT1 594 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 NEK11Q8NG66 645 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 CLEC4CQ8WTT0 213 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 STK32AQ8WU08 396 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 PLD4Q96BZ4 506 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 XPO6Q96QU8 1125 aaKnown RBP18.29■□□□□ 0.52
ITGB4-205ENST00000579211 SPAG5Q96R06 1193 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 TRIM62Q9BVG3 475 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 BBS2Q9BXC9 721 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 FBRSL1Q9HCM7 1045 aaKnown RBP18.29■□□□□ 0.52
ITGB4-205ENST00000579211 WDR35Q9P2L0 1181 aa18.29■□□□□ 0.52
ITGB4-205ENST00000579211 NEDD8-MDP1E9PL57 170 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 CHKAP35790 457 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 OPRD1P41143 372 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 SEC13P55735 322 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 POLR2FP61218 127 aaKnown RBP18.28■□□□□ 0.52
ITGB4-205ENST00000579211 SYCP1Q15431 976 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 ZNF528Q3MIS6 628 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 NAIF1Q69YI7 327 aaPredicted RBP18.28■□□□□ 0.52
ITGB4-205ENST00000579211 TMEM25Q86YD3 366 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 DENND1CQ8IV53 801 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 ATRIPQ8WXE1 791 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 PPP1R13BQ96KQ4 1090 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 NLRC4Q9NPP4 1024 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 ARHGEF4Q9NR80 690 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 DEC1Q9P2X7 70 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 PCDHGC3Q9UN70 934 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 SLC8A2Q9UPR5 921 aa18.28■□□□□ 0.52
ITGB4-205ENST00000579211 HBS1LQ9Y450 684 aaKnown RBP18.28■□□□□ 0.52
ITGB4-205ENST00000579211 LGALS16A8MUM7 142 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 E5RJQ4 531 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 CYBBP04839 570 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 EIF2DP41214 584 aaKnown RBP18.27■□□□□ 0.52
ITGB4-205ENST00000579211 KLK7P49862 253 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 SATB1Q01826 763 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 KDSRQ06136 332 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 PDCLQ13371 301 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms