RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 GTF3C4Q9UKN8 822 aa7.64□□□□□ -1.19
CDK5RAP3-209ENST00000578663 HCN2Q9UL51 889 aa7.64□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ODF2LQ9ULJ1 636 aa7.64□□□□□ -1.19
CDK5RAP3-209ENST00000578663 BTBD3Q9Y2F9 522 aa7.64□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TP53BP1Q12888 1972 aaPredicted RBP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 METTL12A8MUP2 240 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 LAD1O00515 517 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TRIM66O15016 1216 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 NPC1O15118 1278 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CACNG3O60359 315 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 DFNA5O60443 496 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 IL18RAPO95256 599 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 MAOBP27338 520 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 OXTRP30559 389 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 GRIA4P48058 902 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CCT8P50990 548 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 UCNP55089 124 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 NUCB2P80303 420 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 MYO1EQ12965 1108 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ORC1Q13415 861 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 RILPL1Q5EBL4 403 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 GRAMD4Q6IC98 578 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SLC39A4Q6P5W5 647 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 DHRS13Q6UX07 377 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 KIAA1324Q6UXG2 1013 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 DPH6Q7L8W6 267 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 KCNK18Q7Z418 384 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ERICH1Q86X53 443 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ADGRF2Q8IZF7 708 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CACTIN-AS1Q8N1I8 211 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TOP6BLQ8N6T0 577 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SYT2Q8N9I0 419 aaPredicted RBP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SNRNP27Q8WVK2 155 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 OVCA2Q8WZ82 227 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TSC1Q92574 1164 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 IGSF8Q969P0 613 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TOE1Q96GM8 510 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ZFRQ96KR1 1074 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SLITRK1Q96PX8 696 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 USP28Q96RU2 1077 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 RNF38Q9H0F5 515 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CD93Q9NPY3 652 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ITM2CQ9NQX7 267 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SPHK2Q9NRA0 654 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SMPD4Q9NXE4 827 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CHMP5Q9NZZ3 219 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 FTSJ1Q9UET6 329 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CLIC4Q9Y696 253 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 STYXL1Q9Y6J8 313 aa7.63□□□□□ -1.19
CDK5RAP3-209ENST00000578663 GOLGA8CPA6NN73 597 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ACAT1P24752 427 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ANXA13P27216 316 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 PRPHP41219 470 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 WASP42768 502 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ACOT2P49753 483 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TUBP50607 506 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ZNF131P52739 623 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SLC12A3P55017 1021 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TMPRSS3P57727 454 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 USP46P62068 366 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CEBPZQ03701 1054 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TLE1Q04724 770 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 DNM1Q05193 864 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 RAD51AP2Q09MP3 1159 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 STARD3Q14849 445 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 E2F5Q15329 346 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SF3A1Q15459 793 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TEAD4Q15561 434 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CCDC142Q17RM4 750 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 DCAF12L1Q5VU92 463 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SLFN12LQ6IEE8 588 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 LIMS2Q7Z4I7 341 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 FAM26EQ8N5C1 309 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 PDZD8Q8NEN9 1154 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SCFD1Q8WVM8 642 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 FGF11Q92914 225 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TMEM176AQ96HP8 235 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 C8orf48Q96LL4 319 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ACOX2Q99424 681 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SYT15Q9BQS2 421 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 MMTAG2Q9BU76 263 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 GPR174Q9BXC1 333 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 MIR1-1HGQ9H1L0 117 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 LRRC4CQ9HCJ2 640 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 STARD5Q9NSY2 213 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 DNAJC17Q9NVM6 304 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 MARK1Q9P0L2 795 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 GMIPQ9P107 970 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TFIP11Q9UBB9 837 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 MAGEC2Q9UBF1 373 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SEPT3Q9UH03 358 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ITGA11Q9UKX5 1188 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CDH9Q9ULB4 789 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CKAP5Q14008 2032 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 HIVEP3Q5T1R4 2406 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CSMD2Q7Z408 3487 aa7.62□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SDK2Q58EX2 2172 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms