RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 LRRC3Q9BY71 257 aa11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 POPDC2Q9HBU9 364 aa11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 OLA1Q9NTK5 396 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 RRN3Q9NYV6 651 aa11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 GMIPQ9P107 970 aa11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 MYO1AQ9UBC5 1043 aa11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 C2orf16Q68DN1 1984 aa11.72□□□□□ -0.53
TRAPPC8-204ENST00000578252 ANAPC1Q9H1A4 1944 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 TCRBV5S1A1TA0A578 114 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 YJEFN3A6XGL0 299 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 E7ENQ6 273 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 CAPN9O14815 690 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 KRT86O43790 486 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 MTA2O94776 668 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 F11P03951 625 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 RHOP08100 348 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 RALAP11233 206 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 DDX6P26196 483 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 GABRR2P28476 465 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 MTHFRP42898 656 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 RBM10P98175 930 aaKnown RBP11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 MAMLD1Q13495 774 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 IFI16Q16666 785 aaKnown RBP11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 ARHGAP15Q53QZ3 475 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 C2CD6Q53TS8 623 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 BSPRYQ5W0U4 402 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 BTBD8Q5XKL5 378 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 DCUN1D2Q6PH85 259 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 SYCE2Q6PIF2 218 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 TMC5Q6UXY8 1006 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 CLEC4CQ8WTT0 213 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 RNF139Q8WU17 664 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 SLC2A13Q96QE2 648 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 ADAM7Q9H2U9 754 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 ZNF334Q9HCZ1 680 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 CLEC1BQ9P126 229 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 CTTNBP2NLQ9P2B4 639 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 DNMT3BQ9UBC3 853 aaKnown RBP11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 TMEM59LQ9UK28 342 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 PPP2R2CQ9Y2T4 447 aa11.71□□□□□ -0.53
TRAPPC8-204ENST00000578252 CDH23Q9H251 3354 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 A0A1W2PQH9 124 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 FAM170AA1A519 330 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 ZNF840PA6NDX5 716 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 GOLGA6L9A6NEM1 432 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 TBX10O75333 385 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 MYL4P12829 197 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 NOS2P35228 1153 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 MATKP42679 507 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 HADHBP55084 474 aaKnown RBP11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 ATAT1Q5SQI0 421 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 HECTD3Q5T447 861 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 KLHDC10Q6PID8 442 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 EP400NLQ6ZTU2 488 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 RSRC2Q7L4I2 434 aaKnown RBP11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 GRASPQ7Z6J2 395 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 SCD5Q86SK9 330 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 DNAAF5Q86Y56 855 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 C12orf76Q8N812 135 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 FEZF2Q8TBJ5 459 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 ZNF564Q8TBZ8 553 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 FNIP1Q8TF40 1166 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 ARHGEF26Q96DR7 871 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 MSLNLQ96KJ4 702 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 NECTIN4Q96NY8 510 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 MCEEQ96PE7 176 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 NCAPGQ9BPX3 1015 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 NUP85Q9BW27 656 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 HCFC1R1Q9NWW0 138 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 CHORDC1Q9UHD1 332 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 STAP1Q9ULZ2 295 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 DENND4AQ7Z401 1863 aa11.7□□□□□ -0.54
TRAPPC8-204ENST00000578252 TMEM191CA6NGB0 347 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 TLR5O60602 858 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 TADA3O75528 432 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 NCAM1P13591 858 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 RARGP13631 454 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 PDGFRAP16234 1089 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 GPD1P21695 349 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 SDC4P31431 198 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 RFC1P35251 1148 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 LTBRP36941 435 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 ARHGAP25P42331 645 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 PTPN9P43378 593 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 RNASE9P60153 205 aaKnown RBP11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 ACAP1Q15027 740 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 TAF5Q15542 800 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 ARHGAP29Q52LW3 1261 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 PRSS36Q5K4E3 855 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 MSANTD2Q6P1R3 559 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 GAREM2Q75VX8 874 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 PHLDB2Q86SQ0 1253 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 TMEM150AQ86TG1 271 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 DEFB106AQ8N104 65 aa11.69□□□□□ -0.54
TRAPPC8-204ENST00000578252 RNF10Q8N5U6 811 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms