RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 ZRANB2O95218 330 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTC1-203ENST00000578240 KRT7P08729 469 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 RHOXF2BP0C7M4 288 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 KRT10P13645 584 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 ATF2P15336 505 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 KDELR1P24390 212 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 YWHAGP61981 247 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTC1-203ENST00000578240 RAB33AQ14088 237 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 CYP1B1Q16678 543 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 TTC27Q6P3X3 843 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 FAM131BQ86XD5 332 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 DEFB123Q8N688 67 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 ZNF461Q8TAF7 563 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 FAM71BQ8TC56 605 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 DQX1Q8TE96 717 aaKnown RBP13.68□□□□□ -0.22
CTC1-203ENST00000578240 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 UBXN4Q92575 508 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 HSPH1Q92598 858 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 PGAP3Q96FM1 320 aaPredicted RBP13.68□□□□□ -0.22
CTC1-203ENST00000578240 RBM41Q96IZ5 413 aaKnown RBP13.68□□□□□ -0.22
CTC1-203ENST00000578240 RHOXF2Q9BQY4 288 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 RXFP1Q9HBX9 757 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTC1-203ENST00000578240 MTMR10Q9NXD2 777 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 DDX56Q9NY93 547 aaKnown RBP13.68□□□□□ -0.22
CTC1-203ENST00000578240 GMIPQ9P107 970 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 SCML2Q9UQR0 700 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 A0A1W2PQH9 124 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 M0QYT0 321 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 PRPSAP2O60256 369 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 CNPP09543 421 aaKnown RBP13.67□□□□□ -0.22
CTC1-203ENST00000578240 NCAM1P13591 858 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 CTNNB1P35222 781 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 DPYSL3Q14195 570 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 PPP2R5EQ16537 467 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 HADHQ16836 314 aaKnown RBP13.67□□□□□ -0.22
CTC1-203ENST00000578240 DENND5BQ6ZUT9 1274 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 BEND5Q7L4P6 421 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 RCOR2Q8IZ40 523 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 C12orf50Q8NA57 414 aaPredicted RBP13.67□□□□□ -0.22
CTC1-203ENST00000578240 KRT12Q99456 494 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 LRRC1Q9BTT6 524 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 TTLL2Q9BWV7 592 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 HEMGNQ9BXL5 484 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 FNIP2Q9P278 1114 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 DMGDHQ9UI17 866 aaKnown RBP13.67□□□□□ -0.22
CTC1-203ENST00000578240 STAP1Q9ULZ2 295 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 YIPF1Q9Y548 306 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 C5orf42Q9H799 3197 aa13.67□□□□□ -0.22
CTC1-203ENST00000578240 ZSCAN5CA6NGD5 496 aaPredicted RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 BHMG1C9JSJ3 638 aaPredicted RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 CCDC188H7C350 402 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 RAD51CO43502 376 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 IL4RP24394 825 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 BMPR1AP36894 532 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 ERVFC1P60507 584 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 COPS2P61201 443 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 MMRN1Q13201 1228 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 CAMK1Q14012 370 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 TPGS2Q68CL5 300 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 SLC7A14Q8TBB6 771 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 ATG4AQ8WYN0 398 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 SMOC2Q9H3U7 446 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 PCDH18Q9HCL0 1135 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 ALG13Q9NP73 1137 aaKnown RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 MRPL17Q9NRX2 175 aaKnown RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 YBX2Q9Y2T7 364 aaKnown RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 SLC38A8A6NNN8 435 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 PHF2O75151 1096 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 ZDHHC11BP0C7U3 371 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 HMGA1P17096 107 aaKnown RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 DPYSL2Q16555 572 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 TFDP3Q5H9I0 405 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 ARTNQ5T4W7 220 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 SCYL2Q6P3W7 929 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 Q7L0L9 218 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 PYROXD2Q8N2H3 581 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 GIPC2Q8TF65 315 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 ANKRD7Q92527 254 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 CASP10Q92851 521 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 FAF2Q96CS3 445 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 KCTD15Q96SI1 283 aaPredicted RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 NAP1L3Q99457 506 aaPredicted RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
CTC1-203ENST00000578240 FBXO44Q9H4M3 255 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 NUDT5Q9UKK9 219 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 FZD10Q9ULW2 581 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 AP4E1Q9UPM8 1137 aa13.66□□□□□ -0.22
CTC1-203ENST00000578240 NUP210Q8TEM1 1887 aaPredicted RBP13.65□□□□□ -0.22
CTC1-203ENST00000578240 SYNJ2BP-COX16A0A087WUM0 186 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 HIDE1A8MVS5 230 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 CAPN9O14815 690 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms