RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 INCA1Q0VD86 236 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 LMAN2Q12907 356 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 ORC1Q13415 861 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 CAMK4Q16566 473 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 C1orf220Q5T0J3 134 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 C10orf76Q5T2E6 689 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 ISM2Q6H9L7 571 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 SPOPLQ6IQ16 392 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 KLHDC10Q6PID8 442 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 CLEC20AQ6ZU45 233 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 CCDC47Q96A33 483 aaKnown RBP13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 JAKMIP2Q96AA8 810 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 CYFIP2Q96F07 1278 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 TIGD1Q96MW7 591 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 SLC32A1Q9H598 525 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 PNPLA8Q9NP80 782 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 FAM49BQ9NUQ9 324 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 MARK1Q9P0L2 795 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 WDR35Q9P2L0 1181 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 LSM7Q9UK45 103 aaKnown RBP13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 FRYQ5TBA9 3013 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 GOLGA6L22H0YM25 854 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 TRIM24O15164 1050 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 AP5Z1O43299 807 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 CACNG3O60359 315 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 TOP3BO95985 862 aaKnown RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 PROS1P07225 676 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 GABRG2P18507 467 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 ACO1P21399 889 aaKnown RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 ADORA2BP29275 332 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 HOXD12P35452 270 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 ENPEPQ07075 957 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 NFIL3Q16649 462 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 PEAR1Q5VY43 1037 aaPredicted RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 LYSMD4Q5XG99 296 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 GRAMD4Q6IC98 578 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 SDE2Q6IQ49 451 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 SLC23A3Q6PIS1 610 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 UNQ6494/PRO21346Q6UXR6 183 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 SLC36A4Q6YBV0 504 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 INTS8Q75QN2 995 aaKnown RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 GPRIN1Q7Z2K8 1008 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 HDDC3Q8N4P3 179 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 ZNF276Q8N554 614 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 XPO6Q96QU8 1125 aaKnown RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 NT5C1AQ9BXI3 368 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 CYP3A43Q9HB55 503 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 FSCN3Q9NQT6 498 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 TMEM74BQ9NUR3 256 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 DNAJC17Q9NVM6 304 aaKnown RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 OSER1Q9NX31 292 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 HOOK1Q9UJC3 728 aaKnown RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 PILRBQ9UKJ0 227 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 HCN2Q9UL51 889 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 MAPK8IP1Q9UQF2 711 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 PCDHA5Q9Y5H7 936 aa13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 TNRC6BQ9UPQ9 1833 aaKnown RBP13.24□□□□□ -0.29
SMARCD2-207ENST00000578234 A0A1W2PQF6 199 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 NEDD8-MDP1E9PL57 170 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 RHOBTB3O94955 611 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 SMC2O95347 1197 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 HOXB2P14652 356 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 TYRP14679 529 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 NR2F2P24468 414 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 PLA2G4AP47712 749 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 PSEN1P49768 467 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 MIB1Q86YT6 1006 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 SMYD4Q8IYR2 804 aaPredicted RBP13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 RGL4Q8IZJ4 473 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 BHMTQ93088 406 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 TWNKQ96RR1 684 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 DNAI2Q9GZS0 605 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 NMUR1Q9HB89 426 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 CD248Q9HCU0 757 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 DNMT3LQ9UJW3 386 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 ZMIZ1Q9ULJ6 1067 aa13.23□□□□□ -0.29
SMARCD2-207ENST00000578234 PCNX2A6NKB5 2137 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 SPAARA0A1B0GVQ0 90 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 PRRT4C9JH25 899 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 BIN1O00499 593 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 CYP26A1O43174 497 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 CILPO75339 1184 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 ZNF217O75362 1048 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 RARGP13631 454 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 KRT13P13646 458 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 ENGP17813 658 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 ITPKAP23677 461 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 RPL13P26373 211 aaKnown RBP13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 RDXP35241 583 aaKnown RBP13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 GCLMP48507 274 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 KIF11P52732 1056 aa13.22□□□□□ -0.29
SMARCD2-207ENST00000578234 MCCD1P59942 119 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms