RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 HNRNPLP14866 589 aaKnown RBP eCLIP16.88■□□□□ 0.297e-7■■□□□ 12.4
VAPA-204ENST00000577901 TIE1P35590 1138 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 EIF2DP41214 584 aaKnown RBP16.88■□□□□ 0.29
VAPA-204ENST00000577901 MTIF2P46199 727 aaKnown RBP16.88■□□□□ 0.29
VAPA-204ENST00000577901 DHPSP49366 369 aaPredicted RBP16.88■□□□□ 0.29
VAPA-204ENST00000577901 ZNF252P-AS1Q0IIN9 211 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 MESP2Q0VG99 397 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
VAPA-204ENST00000577901 CCDC183Q5T5S1 534 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 SH3PXD2AQ5TCZ1 1133 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 RHBDF2Q6PJF5 856 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 DDX42Q86XP3 938 aaKnown RBP eCLIP16.88■□□□□ 0.29
VAPA-204ENST00000577901 IL17RCQ8NAC3 791 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 TXNDC5Q8NBS9 432 aaKnown RBP16.88■□□□□ 0.29
VAPA-204ENST00000577901 PIGKQ92643 395 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 KCNK16Q96T55 309 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 ARID3AQ99856 593 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 KRT82Q9NSB4 513 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 TMEM30AQ9NV96 361 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 CNOT1A5YKK6 2376 aaKnown RBP16.88■□□□□ 0.29
VAPA-204ENST00000577901 SGK1O00141 431 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 CDX4O14627 284 aaPredicted RBP16.87■□□□□ 0.29
VAPA-204ENST00000577901 MBL2P11226 248 aaPredicted RBP16.87■□□□□ 0.29
VAPA-204ENST00000577901 CHRM1P11229 460 aaPredicted RBP16.87■□□□□ 0.29
VAPA-204ENST00000577901 ADH5P11766 374 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 YWHAQP27348 245 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 ADORA2BP29275 332 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 P2RY2P41231 377 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 IRX4P78413 519 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 HSF5Q4G112 596 aaPredicted RBP16.87■□□□□ 0.29
VAPA-204ENST00000577901 LPCAT2Q7L5N7 544 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 C12orf40Q86WS4 652 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 IRF2BP1Q8IU81 584 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 CSNK1G1Q9HCP0 422 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 POLMQ9NP87 494 aaPredicted RBP16.87■□□□□ 0.29
VAPA-204ENST00000577901 ARHGEF4Q9NR80 690 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 ANO10Q9NW15 660 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 COMMD8Q9NX08 183 aa16.87■□□□□ 0.29
VAPA-204ENST00000577901 CEP295Q9C0D2 2601 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 PTPRDP23468 1912 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 A0A0A0MRY4 1105 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.86■□□□□ 0.29
VAPA-204ENST00000577901 MAP3K13O43283 966 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 CEACAM1P13688 526 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 GRIA2P42262 883 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 TNFRSF4P43489 277 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 KIR2DL1P43626 348 aaPredicted RBP16.86■□□□□ 0.29
VAPA-204ENST00000577901 RAD23BP54727 409 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 MAP3K7CLP57077 242 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 KDSRQ06136 332 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 FOXC1Q12948 553 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 EOGTQ5NDL2 527 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 EMC10Q5UCC4 262 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 PPM1KQ8N3J5 372 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 LMO3Q8TAP4 145 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 RLN3Q8WXF3 142 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 SPACA7Q96KW9 195 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 ZDHHC4Q9NPG8 344 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 BCCIPQ9P287 314 aaKnown RBP eCLIP16.86■□□□□ 0.29
VAPA-204ENST00000577901 TBC1D14Q9P2M4 693 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 WDFY3Q8IZQ1 3526 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 CHD6Q8TD26 2715 aa16.86■□□□□ 0.29
VAPA-204ENST00000577901 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 E2F8A0AVK6 867 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 CSRP1P21291 193 aaKnown RBP16.85■□□□□ 0.29
VAPA-204ENST00000577901 MAN2A1Q16706 1144 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 UAP1L1Q3KQV9 507 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 PPP1R26Q5T8A7 1209 aaPredicted RBP16.85■□□□□ 0.29
VAPA-204ENST00000577901 UNQ6494/PRO21346Q6UXR6 183 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 TMEFF1Q8IYR6 380 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 FRMD1Q8N878 549 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 SLC4A11Q8NBS3 891 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
VAPA-204ENST00000577901 OVCA2Q8WZ82 227 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 FBXO32Q969P5 355 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 SMOQ99835 787 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 INTS2Q9H0H0 1204 aaKnown RBP16.85■□□□□ 0.29
VAPA-204ENST00000577901 FBXO44Q9H4M3 255 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 EVLQ9UI08 416 aaPredicted RBP16.85■□□□□ 0.29
VAPA-204ENST00000577901 MBD1Q9UIS9 605 aaPredicted RBP16.85■□□□□ 0.29
VAPA-204ENST00000577901 KIAA1257Q9ULG3 409 aa16.85■□□□□ 0.29
VAPA-204ENST00000577901 TCRBV21S2A2A0A5A6 115 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 C1QTNF9BB2RNN3 333 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 TNFRSF10BO14763 440 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 COCHO43405 550 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 ADAM23O75077 832 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 BEST1O76090 585 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 C1QTNF9P0C862 333 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
VAPA-204ENST00000577901 PTGER3P43115 390 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 SLC5A3P53794 718 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 SLC8A3P57103 927 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 GCNT1Q02742 428 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 GAD2Q05329 585 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 LMAN2Q12907 356 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 BYSLQ13895 437 aaKnown RBP16.84■□□□□ 0.29
VAPA-204ENST00000577901 STX1AQ16623 288 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 TRIM61Q5EBN2 209 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 LY6G5CQ5SRR4 150 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms