RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 SPOPLQ6IQ16 392 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 KAT5Q92993 513 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 ATP2A3Q93084 1043 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 MYLPFQ96A32 169 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 FUBP3Q96I24 572 aaKnown RBP eCLIP18.23■□□□□ 0.51
ABR-236ENST00000577052 NT5C1BQ96P26 610 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 PANX2Q96RD6 677 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 TPSD1Q9BZJ3 242 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 APOBEC3GQ9HC16 384 aaKnown RBP18.23■□□□□ 0.51
ABR-236ENST00000577052 TMEM30AQ9NV96 361 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 DNAJC12Q9UKB3 198 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 ARHGAP26Q9UNA1 814 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 WASF3Q9UPY6 502 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 DAAM1Q9Y4D1 1078 aa18.23■□□□□ 0.51
ABR-236ENST00000577052 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
ABR-236ENST00000577052 LNP1A1A4G5 178 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 C4orf47A7E2U8 309 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 PATE3B3GLJ2 98 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 ASS1P00966 412 aaKnown RBP18.22■□□□□ 0.51
ABR-236ENST00000577052 CST3P01034 146 aaPredicted RBP18.22■□□□□ 0.51
ABR-236ENST00000577052 MAGEA11P43364 429 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 LHX1P48742 406 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 DGKEP52429 567 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 SEC13P55735 322 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 MYL6P60660 151 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 NOP14P78316 857 aaKnown RBP18.22■□□□□ 0.51
ABR-236ENST00000577052 RBP5P82980 135 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 PMS2CLQ68D20 193 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 PSAPL1Q6NUJ1 521 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 RRAGAQ7L523 313 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 RASSF3Q86WH2 238 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 SPATA2LQ8IUW3 424 aaPredicted RBP18.22■□□□□ 0.51
ABR-236ENST00000577052 SPATA18Q8TC71 538 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 TATDN2Q93075 761 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 KREMEN1Q96MU8 473 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 SYT15Q9BQS2 421 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 EDEM2Q9BV94 578 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 RNF38Q9H0F5 515 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 XYLT2Q9H1B5 865 aa18.22■□□□□ 0.51
ABR-236ENST00000577052 TNRC6BQ9UPQ9 1833 aaKnown RBP18.21■□□□□ 0.51
ABR-236ENST00000577052 ASPMQ8IZT6 3477 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 ASCC3Q8N3C0 2202 aaKnown RBP18.21■□□□□ 0.51
ABR-236ENST00000577052 LEFTY2O00292 366 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 TOP3BO95985 862 aaKnown RBP18.21■□□□□ 0.51
ABR-236ENST00000577052 HDCP19113 662 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 BDNFP23560 247 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 HNRNPH3P31942 346 aaKnown RBP18.21■□□□□ 0.51
ABR-236ENST00000577052 CACNA2D1P54289 1103 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 RAPGEF1Q13905 1077 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 MEA1Q16626 185 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 C2orf27AQ580R0 203 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 TMEM92Q6UXU6 159 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 OR8K1Q8NGG5 319 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 TRIM44Q96DX7 344 aaPredicted RBP18.21■□□□□ 0.51
ABR-236ENST00000577052 MYO6Q9UM54 1294 aa18.21■□□□□ 0.51
ABR-236ENST00000577052 GON4LQ3T8J9 2241 aa18.21■□□□□ 0.5
ABR-236ENST00000577052 MYO18AQ92614 2054 aaKnown RBP18.2■□□□□ 0.5
ABR-236ENST00000577052 F8VZ95 297 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 CDX4O14627 284 aaPredicted RBP18.2■□□□□ 0.5
ABR-236ENST00000577052 SCAMP3O14828 347 aaKnown RBP18.2■□□□□ 0.5
ABR-236ENST00000577052 RHOBTB1O94844 696 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 CYP17A1P05093 508 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 PDGFRBP09619 1106 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 PNMA6AP0CW24 399 aaPredicted RBP18.2■□□□□ 0.5
ABR-236ENST00000577052 PCSK1P29120 753 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 SLC6A11P48066 632 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 GCNT1Q02742 428 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 TRPC3Q13507 836 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 DRAP1Q14919 205 aaPredicted RBP18.2■□□□□ 0.5
ABR-236ENST00000577052 ELF2Q15723 593 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 ZNF699Q32M78 642 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 WDR59Q6PJI9 974 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 C12orf40Q86WS4 652 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 PPM1KQ8N3J5 372 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 CCDC33Q8N5R6 958 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 FRMD1Q8N878 549 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 ZNF397Q8NF99 534 aaPredicted RBP18.2■□□□□ 0.5
ABR-236ENST00000577052 MDGA1Q8NFP4 955 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 ACDQ96AP0 544 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 SPATA17Q96L03 361 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 TMEM121BQ9BXQ6 578 aaPredicted RBP18.2■□□□□ 0.5
ABR-236ENST00000577052 STK33Q9BYT3 514 aa18.2■□□□□ 0.5
ABR-236ENST00000577052 UBE2TQ9NPD8 197 aaPredicted RBP18.2■□□□□ 0.5
ABR-236ENST00000577052 C1QTNF9BB2RNN3 333 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 OLFM2O95897 454 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 C1QTNF9P0C862 333 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 ADGRG2Q8IZP9 1017 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 CCDC112Q8NEF3 446 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 TSTD1Q8NFU3 115 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 OLIG1Q8TAK6 271 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 PCED1BQ96HM7 432 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 HPDLQ96IR7 371 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 SPAG5Q96R06 1193 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 ARID3AQ99856 593 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 BAG1Q99933 345 aaPredicted RBP18.19■□□□□ 0.5
ABR-236ENST00000577052 MRPL45Q9BRJ2 306 aaKnown RBP18.19■□□□□ 0.5
ABR-236ENST00000577052 TTLL2Q9BWV7 592 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 IMPG2Q9BZV3 1241 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 CDH9Q9ULB4 789 aa18.19■□□□□ 0.5
ABR-236ENST00000577052 ZNF840PA6NDX5 716 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms