RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PTP4A2Q12974 167 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 MEA1Q16626 185 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 SNX30Q5VWJ9 437 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 BSPRYQ5W0U4 402 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 HGSNATQ68CP4 663 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 PM20D1Q6GTS8 502 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 TXNDC11Q6PKC3 985 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 TAC4Q86UU9 113 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 XYLT1Q86Y38 959 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 BBS7Q8IWZ6 715 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 PLCD3Q8N3E9 789 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 BPIFB1Q8TDL5 484 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 OVCA2Q8WZ82 227 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 BHMTQ93088 406 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 FAM149B1Q96BN6 582 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 MYEOVQ96EZ4 313 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 PPP1R13BQ96KQ4 1090 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 FAM81BQ96LP2 452 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 BAG1Q99933 345 aaPredicted RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 NUP58Q9BVL2 599 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 KLF16Q9BXK1 252 aaPredicted RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 EDEM3Q9BZQ6 932 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 FBXO44Q9H4M3 255 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 HAUS4Q9H6D7 363 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 CYLDQ9NQC7 956 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 TLR8Q9NR97 1041 aaKnown RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 TMPRSS4Q9NRS4 437 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 ABHD10Q9NUJ1 306 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 IGSF9Q9P2J2 1179 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 RAPGEFL1Q9UHV5 662 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 KIAA1257Q9ULG3 409 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 ARHGAP26Q9UNA1 814 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 MTF2Q9Y483 593 aaPredicted RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 ZDBF2Q9HCK1 2354 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 ATG2BQ96BY7 2078 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 SYNJ2BP-COX16A0A087WUM0 186 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 TMEM221A6NGB7 291 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 M0R296 226 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 DDX3XO00571 662 aaKnown RBP eCLIP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 DPYSL4O14531 572 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 TRIM24O15164 1050 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 NRDCO43847 1150 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 LTFP02788 710 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 KLKB1P03952 638 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 CYP1A1P04798 512 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 UNGP13051 313 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 PSMC3P17980 439 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 DDX6P26196 483 aaKnown RBP eCLIP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 CDH5P33151 784 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 NUMBP49757 651 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 SGSHP51688 502 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 SLC8A3P57103 927 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 SLC7A9P82251 487 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 CDK17Q00537 523 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 FCHO2Q0JRZ9 810 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 STILQ15468 1287 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 GAB4Q2WGN9 574 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 EML3Q32P44 896 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 OR6B2Q6IFH4 312 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 WDR59Q6PJI9 974 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 TPRG1Q6ZUI0 275 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 TMEM110Q86TL2 294 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 C12orf40Q86WS4 652 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 FMNL3Q8IVF7 1028 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 MFSD6LQ8IWD5 586 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 REXO1L1PQ8IX06 675 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 CELF5Q8N6W0 485 aaKnown RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 EMC1Q8N766 993 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 PDZD8Q8NEN9 1154 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 JOSD2Q8TAC2 188 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 DQX1Q8TE96 717 aaKnown RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 EDAQ92838 391 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 CEP295NLQ96MC4 621 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 AGPAT1Q99943 283 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 TRMT61BQ9BVS5 477 aaKnown RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 UBXN6Q9BZV1 441 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 TRIM7Q9C029 511 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 NACA2Q9H009 215 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 PDCL3Q9H2J4 239 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 BRD9Q9H8M2 597 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 ZDHHC4Q9NPG8 344 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 ANLNQ9NQW6 1124 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 CNGB3Q9NQW8 809 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 ARHGEF3Q9NR81 526 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 METTL5Q9NRN9 209 aaKnown RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 POLR3BQ9NW08 1133 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 COX16Q9P0S2 106 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 XPO7Q9UIA9 1087 aaKnown RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 FBXL21Q9UKT6 434 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 SNX10Q9Y5X0 201 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 ZFP37Q9Y6Q3 630 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-215ENST00000576033 ZNF318Q5VUA4 2279 aa8.27□□□□□ -1.09
CCDC40-215ENST00000576033 MUC22E2RYF6 1773 aaPredicted RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 GOLGA6L7A0A1B0GV03 622 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 SLC12A8A0AV02 714 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 I6L893 689 aaPredicted RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 ZNF263O14978 683 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 CCP110O43303 1012 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms