RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PARVGQ9HBI0 331 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 CPNE5Q9HCH3 593 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 GDAP2Q9NXN4 497 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 MARK1Q9P0L2 795 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 IL17BQ9UHF5 180 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 CLCA2Q9UQC9 943 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.25□□□□□ -1.41
SMG6-219ENST00000575663 PTPRBP23467 1997 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 ASXL3Q9C0F0 2248 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 PP2D1A8MPX8 630 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 WASH3PC4AMC7 463 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 HCRTO43612 131 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 TRAK2O60296 914 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 KRT18P05783 430 aaKnown RBP6.24□□□□□ -1.41
SMG6-219ENST00000575663 TMEM191BP0C7N4 346 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 PLA2G4BP0C869 781 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 PLCG1P19174 1290 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 CD27P26842 260 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 YWHAQP27348 245 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 ARRB1P49407 418 aaPredicted RBP6.24□□□□□ -1.41
SMG6-219ENST00000575663 SLC12A3P55017 1021 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 RBP5P82980 135 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 GUCY1B3Q02153 619 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 ARID5AQ03989 594 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 POSTNQ15063 836 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 SOWAHAQ2M3V2 549 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 MDH1BQ5I0G3 518 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 COLEC12Q5KU26 742 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 HYIQ5T013 277 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 SLC39A4Q6P5W5 647 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 LAYNQ6UX15 382 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 DTHD1Q6ZMT9 781 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 ZNF574Q6ZN55 896 aaPredicted RBP6.24□□□□□ -1.41
SMG6-219ENST00000575663 TPGS1Q6ZTW0 290 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 HS2ST1Q7LGA3 356 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 FAM124AQ86V42 546 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 GATAD2AQ86YP4 633 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 BRSK2Q8IWQ3 736 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 CSGALNACT2Q8N6G5 542 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 C1orf127Q8N9H9 656 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 NSUN7Q8NE18 718 aaKnown RBP6.24□□□□□ -1.41
SMG6-219ENST00000575663 MYCBPAPQ8TBZ2 947 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 POMGNT1Q8WZA1 660 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 PCED1BQ96HM7 432 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 ELF4Q99607 663 aaPredicted RBP6.24□□□□□ -1.41
SMG6-219ENST00000575663 REEP2Q9BRK0 252 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 DPH1Q9BZG8 443 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 BTBD1Q9H0C5 482 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 LHX5Q9H2C1 402 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 ZHX3Q9H4I2 956 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 CRTAC1Q9NQ79 661 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 ADAMTS1Q9UHI8 967 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 HELZP42694 1942 aaKnown RBP6.24□□□□□ -1.41
SMG6-219ENST00000575663 MYO18BQ8IUG5 2567 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 COL5A1P20908 1838 aaPredicted RBP6.24□□□□□ -1.41
SMG6-219ENST00000575663 HECTD1Q9ULT8 2610 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 ATP8B3O60423 1300 aa6.24□□□□□ -1.41
SMG6-219ENST00000575663 PI4KAP42356 2102 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 BSNQ9UPA5 3926 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 NPHP3-ACAD11A0A0J9YXS1 232 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 CBX4O00257 560 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 KCNK3O14649 394 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 KLK10O43240 276 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 TLR5O60602 858 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 JAK2O60674 1132 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 ATP2C2O75185 946 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 FSBPO95073 299 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 SEMA4FO95754 770 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 LDHAP00338 332 aaKnown RBP6.23□□□□□ -1.41
SMG6-219ENST00000575663 EPHX1P07099 455 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 CKMT2P17540 419 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 EPHA8P29322 1005 aaPredicted RBP6.23□□□□□ -1.41
SMG6-219ENST00000575663 PRPHP41219 470 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 ZNF131P52739 623 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 COPAP53621 1224 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 ERVPABLB-1P60509 514 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 RACK1P63244 317 aaKnown RBP6.23□□□□□ -1.41
SMG6-219ENST00000575663 ZBTB16Q05516 673 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 GRIN1Q05586 938 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 NFATC3Q12968 1075 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 EIF4HQ15056 248 aaKnown RBP6.23□□□□□ -1.41
SMG6-219ENST00000575663 TTC31Q49AM3 519 aaPredicted RBP6.23□□□□□ -1.41
SMG6-219ENST00000575663 HS1BP3Q53T59 392 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 SNX30Q5VWJ9 437 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 SERPINA13PQ6UXR4 307 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 KDM7AQ6ZMT4 941 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 ATG14Q6ZNE5 492 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 HTR3DQ70Z44 454 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 ANKS1BQ7Z6G8 1248 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 GPBP1Q86WP2 473 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 NUP93Q8N1F7 819 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 OXR1Q8N573 874 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 EID2Q8N6I1 236 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 DCBLD1Q8N8Z6 715 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 OR2T3Q8NH03 318 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 SNRNP27Q8WVK2 155 aaKnown RBP6.23□□□□□ -1.41
SMG6-219ENST00000575663 RFFLQ8WZ73 363 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 BIRC7Q96CA5 298 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 ANKRD36BP1Q96IX9 119 aa6.23□□□□□ -1.41
SMG6-219ENST00000575663 HIC2Q96JB3 615 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms