RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 COPB1P53618 953 aaKnown RBP13.9□□□□□ -0.18
RPAIN-216ENST00000575599 NHLH1Q02575 133 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 LRRC32Q14392 662 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 KLHDC7AQ5VTJ3 777 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 BTBD8Q5XKL5 378 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 PM20D1Q6GTS8 502 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 KLHDC10Q6PID8 442 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 BHLHA9Q7RTU4 235 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 C1orf210Q8IVY1 113 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 BBS7Q8IWZ6 715 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 ZNF606Q8WXB4 792 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 ATOH1Q92858 354 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-216ENST00000575599 TRIM5Q9C035 493 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 CNGB3Q9NQW8 809 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 TBC1D14Q9P2M4 693 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 LSM7Q9UK45 103 aaKnown RBP13.9□□□□□ -0.18
RPAIN-216ENST00000575599 YJEFN3A6XGL0 299 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 E7ENQ6 273 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 FOXN3O00409 490 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-216ENST00000575599 LAMTOR5O43504 91 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 HMBSP08397 361 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 UCHL3P15374 230 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 PLA2G5P39877 138 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 GPD2P43304 727 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 DAOAP59103 153 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 PTK2Q05397 1052 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 GRSF1Q12849 480 aaKnown RBP eCLIP13.89□□□□□ -0.19
RPAIN-216ENST00000575599 MTAPQ13126 283 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 DRAP1Q14919 205 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-216ENST00000575599 DHCR24Q15392 516 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 Q6ZS52 159 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 SLC47A2Q86VL8 602 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 PASD1Q8IV76 773 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 KIAA1958Q8N8K9 716 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 CLEC4CQ8WTT0 213 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 EDEM1Q92611 657 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 HSFY1Q96LI6 401 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 PCMTD1Q96MG8 357 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-216ENST00000575599 P2RY13Q9BPV8 354 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 MIS12Q9H081 205 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 HSD3B7Q9H2F3 369 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 CHRDQ9H2X0 955 aa13.89□□□□□ -0.19
RPAIN-216ENST00000575599 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-216ENST00000575599 LIMA1Q9UHB6 759 aaKnown RBP13.89□□□□□ -0.19
RPAIN-216ENST00000575599 TRDMT1O14717 391 aaKnown RBP13.88□□□□□ -0.19
RPAIN-216ENST00000575599 ADH1CP00326 375 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 ATP1A3P13637 1013 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 ZNF18P17022 549 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 GALK1P51570 392 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 FANCCQ00597 558 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 TMEM196Q5HYL7 178 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 DGKKQ5KSL6 1271 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 BSPRYQ5W0U4 402 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 FSTL4Q6MZW2 842 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 ADGRG2Q8IZP9 1017 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 ZNF276Q8N554 614 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 RNF139Q8WU17 664 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 GOLGA1Q92805 767 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 CD101Q93033 1021 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 EXOC4Q96A65 974 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 IRF2BPLQ9H1B7 796 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 MARCH2Q9P0N8 246 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 STRIP2Q9ULQ0 834 aa13.88□□□□□ -0.19
RPAIN-216ENST00000575599 SLC12A8A0AV02 714 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 STC2O76061 302 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 FBXO21O94952 628 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 EGFP01133 1207 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 ADH5P11766 374 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 CLCN1P35523 988 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 UBASH3AP57075 661 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 UBXN1Q04323 297 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 PDCLQ13371 301 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 CCINQ13939 588 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 SYCP1Q15431 976 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 MEA1Q16626 185 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 ANO4Q32M45 955 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 LY6G5CQ5SRR4 150 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 RHBDF2Q6PJF5 856 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 HTR3DQ70Z44 454 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 FAM71AQ8IYT1 594 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 SCML4Q8N228 414 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 IRGQQ8WZA9 623 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 OTUB2Q96DC9 234 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
RPAIN-216ENST00000575599 GANQ9H2C0 597 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 FBRSL1Q9HCM7 1045 aaKnown RBP13.87□□□□□ -0.19
RPAIN-216ENST00000575599 PLCB1Q9NQ66 1216 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 ABCC13Q9NSE7 274 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 OLA1Q9NTK5 396 aaKnown RBP13.87□□□□□ -0.19
RPAIN-216ENST00000575599 CYTH4Q9UIA0 394 aa13.87□□□□□ -0.19
RPAIN-216ENST00000575599 E5RJQ4 531 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 F8VZ95 297 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 GREM1O60565 184 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 LTFP02788 710 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 DRD1P21728 446 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 CORO1AP31146 461 aaKnown RBP13.86□□□□□ -0.19
RPAIN-216ENST00000575599 KRT9P35527 623 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 OPRD1P41143 372 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms