RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 RGS7P49802 495 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 GALK1P51570 392 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 UBXN1Q04323 297 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 RAPGEF1Q13905 1077 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 ZNF528Q3MIS6 628 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 DENND1BQ6P3S1 775 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 Q6ZNB5 142 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 RSRC2Q7L4I2 434 aaKnown RBP14.22□□□□□ -0.13
CIITA-210ENST00000575513 SLC47A2Q86VL8 602 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 RNF139Q8WU17 664 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 GOLGA1Q92805 767 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 CD101Q93033 1021 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 NOX5Q96PH1 765 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 GANQ9H2C0 597 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 CBX8Q9HC52 389 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 NUDT5Q9UKK9 219 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 HBS1LQ9Y450 684 aaKnown RBP14.22□□□□□ -0.13
CIITA-210ENST00000575513 TICRRQ7Z2Z1 1910 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 A0A0A0MRY4 1105 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 F8VZ95 297 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 LAMTOR5O43504 91 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 STC2O76061 302 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 LTFP02788 710 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 CYP11B1P15538 503 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 ZNF445P59923 1031 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 NHLH1Q02575 133 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 GAD2Q05329 585 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 EFEMP1Q12805 493 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 MTAPQ13126 283 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 PPP2R5DQ14738 602 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 GAB4Q2WGN9 574 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 PREPLQ4J6C6 727 aaPredicted RBP14.21□□□□□ -0.13
CIITA-210ENST00000575513 FSTL4Q6MZW2 842 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 MSANTD2Q6P1R3 559 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 LRSAM1Q6UWE0 723 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 ZNF677Q86XU0 584 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 MIB1Q86YT6 1006 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 BBS7Q8IWZ6 715 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 SCUBE3Q8IX30 993 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 SPEM1Q8N4L4 309 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 WDTC1Q8N5D0 677 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 NDRG1Q92597 394 aaKnown RBP14.21□□□□□ -0.13
CIITA-210ENST00000575513 PLD4Q96BZ4 506 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 SPHK2Q9NRA0 654 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 ST7Q9NRC1 585 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 SPATA6Q9NWH7 488 aaPredicted RBP14.21□□□□□ -0.13
CIITA-210ENST00000575513 CEP83Q9Y592 693 aa14.21□□□□□ -0.13
CIITA-210ENST00000575513 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 H0Y858 1186 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 MDM4O15151 490 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 HOXC11O43248 304 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 ATG13O75143 517 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 PAPSS2O95340 614 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 GLI1P08151 1106 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 IRF1P10914 325 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 ADH5P11766 374 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 ATP1A3P13637 1013 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 CDH5P33151 784 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 CHKAP35790 457 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 PLA2G5P39877 138 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 OPRD1P41143 372 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 CCR3P51677 355 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 JAM2P57087 298 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 POLR2FP61218 127 aaKnown RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 PDCLQ13371 301 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 SYCP1Q15431 976 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 TRIP4Q15650 581 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 LY6G5CQ5SRR4 150 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 MAML2Q8IZL2 1156 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 NEK11Q8NG66 645 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 ATOH1Q92858 354 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 WBP2Q969T9 261 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 FAM122AQ96E09 287 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 PPP1R13BQ96KQ4 1090 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 FAM126AQ9BYI3 521 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 TSPY26PQ9H489 355 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 PRMT8Q9NR22 394 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 FAM207AQ9NSI2 230 aaPredicted RBP14.2□□□□□ -0.14
CIITA-210ENST00000575513 MARK1Q9P0L2 795 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 WDR35Q9P2L0 1181 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 CYTH4Q9UIA0 394 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 RASAL2Q9UJF2 1139 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
CIITA-210ENST00000575513 HELZP42694 1942 aaKnown RBP14.19□□□□□ -0.14
CIITA-210ENST00000575513 SLC12A8A0AV02 714 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 CHURC1-FNTBB4DL54 471 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 PAPSS1O43252 624 aaPredicted RBP14.19□□□□□ -0.14
CIITA-210ENST00000575513 LSM8O95777 96 aaKnown RBP14.19□□□□□ -0.14
CIITA-210ENST00000575513 LATS1O95835 1130 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 KLKB1P03952 638 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 SOX5P35711 763 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 HARS2P49590 506 aaKnown RBP14.19□□□□□ -0.14
CIITA-210ENST00000575513 YWHAZP63104 245 aaKnown RBP14.19□□□□□ -0.14
CIITA-210ENST00000575513 RING1Q06587 406 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 NNTQ13423 1086 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 FILIP1LQ4L180 1135 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 ZDHHC17Q8IUH5 632 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 FMNL3Q8IVF7 1028 aa14.19□□□□□ -0.14
CIITA-210ENST00000575513 TMEM35BQ8NCS4 154 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms