RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
TVP23B-208ENST00000575261 DNAI2Q9GZS0 605 aa11.02□□□□□ -0.65
TVP23B-208ENST00000575261 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
TVP23B-208ENST00000575261 MARK1Q9P0L2 795 aa11.02□□□□□ -0.65
TVP23B-208ENST00000575261 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.65
TVP23B-208ENST00000575261 WASF3Q9UPY6 502 aa11.02□□□□□ -0.65
TVP23B-208ENST00000575261 PCDHA5Q9Y5H7 936 aa11.02□□□□□ -0.65
TVP23B-208ENST00000575261 CEP192Q8TEP8 1941 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 A0A1W2PQF6 199 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 C1QTNF9BB2RNN3 333 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 TRIM24O15164 1050 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 MAPK13O15264 365 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 CALUO43852 315 aaPredicted RBP11.01□□□□□ -0.65
TVP23B-208ENST00000575261 GREM1O60565 184 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 KIF20AO95235 890 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 TBX18O95935 607 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 C1QTNF9P0C862 333 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 NDUFV2P19404 249 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 ACO1P21399 889 aaKnown RBP11.01□□□□□ -0.65
TVP23B-208ENST00000575261 WASP42768 502 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 DGKGP49619 791 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 PSEN1P49768 467 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 DNM1Q05193 864 aaKnown RBP11.01□□□□□ -0.65
TVP23B-208ENST00000575261 GFPT1Q06210 699 aaPredicted RBP11.01□□□□□ -0.65
TVP23B-208ENST00000575261 DUOXA1Q1HG43 343 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 TPGS1Q6ZTW0 290 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 TADA2BQ86TJ2 420 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 HDDC3Q8N4P3 179 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 IPO4Q8TEX9 1081 aaKnown RBP11.01□□□□□ -0.65
TVP23B-208ENST00000575261 CYFIP2Q96F07 1278 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 HNRNPABQ99729 332 aaKnown RBP11.01□□□□□ -0.65
TVP23B-208ENST00000575261 GABRG3Q99928 467 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 NT5C1AQ9BXI3 368 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 CYP3A43Q9HB55 503 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.01□□□□□ -0.65
TVP23B-208ENST00000575261 USP25Q9UHP3 1055 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 DNMT3LQ9UJW3 386 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 HCN2Q9UL51 889 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 GON4LQ3T8J9 2241 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 DSPP15924 2871 aaKnown RBP11.01□□□□□ -0.65
TVP23B-208ENST00000575261 PCDH15Q96QU1 1955 aa11.01□□□□□ -0.65
TVP23B-208ENST00000575261 CACNA1EQ15878 2313 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 IGHV1OR15-9A0A0B4J2B8 117 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 A0A1W2PQH9 124 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 TMEM8BA6NDV4 472 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 UPK3BL1B0FP48 263 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 HHLA1C9JL84 531 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 UPK3BL2E5RIL1 263 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 SERPINF2P08697 491 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 RARGP13631 454 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 PFKFB1P16118 471 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 SPINK2P20155 84 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 NR2F2P24468 414 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 VAMP7P51809 220 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 ZNF33AQ06730 810 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 NFIL3Q16649 462 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 C10orf120Q5SQS8 335 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 C1orf220Q5T0J3 134 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 TOGARAM2Q6ZUX3 1019 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 INTS8Q75QN2 995 aaKnown RBP11□□□□□ -0.65
TVP23B-208ENST00000575261 CCDC150Q8NCX0 1101 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 CCDC47Q96A33 483 aaKnown RBP11□□□□□ -0.65
TVP23B-208ENST00000575261 HSPA12BQ96MM6 686 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 TWNKQ96RR1 684 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 CDK5RAP1Q96SZ6 601 aaKnown RBP11□□□□□ -0.65
TVP23B-208ENST00000575261 ACOX2Q99424 681 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 GTPBP2Q9BX10 602 aaKnown RBP11□□□□□ -0.65
TVP23B-208ENST00000575261 NIF3L1Q9GZT8 377 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 CAPN10Q9HC96 672 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 CD248Q9HCU0 757 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 OSER1Q9NX31 292 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 CACNA2D2Q9NY47 1150 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 NAGPAQ9UK23 515 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 RCOR1Q9UKL0 485 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 SLC6A14Q9UN76 642 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 CYP8B1Q9UNU6 501 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
TVP23B-208ENST00000575261 PKD1L2Q7Z442 2459 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 LAMA5O15230 3695 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 A0A1B0GVL5 298 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 A0A1W2PQD8 194 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 PRRT4C9JH25 899 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 GFRA2O00451 464 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 MDM4O15151 490 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 OPHN1O60890 802 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 CILPO75339 1184 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 TRIM49P0CI25 452 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 TRIM49CP0CI26 452 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 RALAP11233 206 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 KRT13P13646 458 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 CD58P19256 250 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 CMA1P23946 247 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 PLA2G4AP47712 749 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 GCLMP48507 274 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 KIF11P52732 1056 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 ENPEPQ07075 957 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 SEMA3BQ13214 749 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 PKP1Q13835 747 aa10.99□□□□□ -0.65
TVP23B-208ENST00000575261 STARD3Q14849 445 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms