RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 NRG3P56975 720 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 MGAT5Q09328 741 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 TFCP2Q12800 502 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 PRPF4BQ13523 1007 aaKnown RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 PUM1Q14671 1186 aaKnown RBP eCLIP5.35□□□□□ -1.55
TSR1-203ENST00000575049 SEC23BQ15437 767 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 KRTCAP3Q53RY4 240 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 ALKBH5Q6P6C2 394 aaKnown RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 USP17L6PQ6QN14 398 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 RAPH1Q70E73 1250 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 SLFN11Q7Z7L1 901 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 CLEC14AQ86T13 490 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 CCDC170Q8IYT3 715 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 NUP93Q8N1F7 819 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 ZGPATQ8N5A5 531 aaKnown RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 USP38Q8NB14 1042 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 Q8NFD4 153 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 CPT1CQ8TCG5 803 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 SLC22A17Q8WUG5 538 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 GCDHQ92947 438 aaPredicted RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 JAKMIP2Q96AA8 810 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 SLC7A6OSQ96CW6 309 aaPredicted RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 ZNF764Q96H86 408 aaPredicted RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 FNBP1Q96RU3 617 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 IWS1Q96ST2 819 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 C12orf65Q9H3J6 166 aaKnown RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 RABEP2Q9H5N1 569 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 BRF2Q9HAW0 419 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 CYP4F11Q9HBI6 524 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 TRMT1Q9NXH9 659 aaKnown RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 MORF4L1Q9UBU8 362 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 MID2Q9UJV3 735 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 RABL2BQ9UNT1 228 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 SH3BP1Q9Y3L3 701 aa5.35□□□□□ -1.55
TSR1-203ENST00000575049 RBM8AQ9Y5S9 174 aaKnown RBP5.35□□□□□ -1.55
TSR1-203ENST00000575049 GCC2Q8IWJ2 1684 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 B8ZZF3 427 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 PCDH17O14917 1159 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 TSPAN3O60637 253 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 TBX10O75333 385 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 MATN4O95460 622 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 NTSR2O95665 410 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 TPM2P07951 284 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 ALAS1P13196 640 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 IFNAR1P17181 557 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 FGFR4P22455 802 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 TM4SF1P30408 202 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 PSMC2P35998 433 aaKnown RBP5.34□□□□□ -1.55
TSR1-203ENST00000575049 PIK3CGP48736 1102 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 ADCY7P51828 1080 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 ALDH18A1P54886 795 aaKnown RBP5.34□□□□□ -1.55
TSR1-203ENST00000575049 RPS3AP61247 264 aaKnown RBP5.34□□□□□ -1.55
TSR1-203ENST00000575049 RBP5P82980 135 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 ATP2C1P98194 919 aaPredicted RBP5.34□□□□□ -1.55
TSR1-203ENST00000575049 BFSP1Q12934 665 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 COG2Q14746 738 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 KYNUQ16719 465 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 PRICKLE4Q2TBC4 344 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 PARP10Q53GL7 1025 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 SETMARQ53H47 684 aaPredicted RBP5.34□□□□□ -1.55
TSR1-203ENST00000575049 ODF2Q5BJF6 829 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 PRAMEF14Q5SWL7 426 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 FAM69AQ5T7M9 428 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 DCAF12L1Q5VU92 463 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 GALNT17Q6IS24 598 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 TCTN3Q6NUS6 607 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 DENND5BQ6ZUT9 1274 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 BTN2A1Q7KYR7 527 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 RAB11FIP2Q7L804 512 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 TAX1BP1Q86VP1 789 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 KRT73Q86Y46 540 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 CCDC28AQ8IWP9 274 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 YAF2Q8IY57 180 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 PLA2G15Q8NCC3 412 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 PPP1R14CQ8TAE6 165 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 N4BP2L2Q92802 583 aaPredicted RBP5.34□□□□□ -1.55
TSR1-203ENST00000575049 C3orf49Q96BT1 292 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 CYFIP2Q96F07 1278 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 LOXL4Q96JB6 756 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 FUZQ9BT04 418 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 VPS16Q9H269 839 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 SLC6A15Q9H2J7 730 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 ERVMER34-1Q9H9K5 563 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 MSL2Q9HCI7 577 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 HEYLQ9NQ87 328 aaPredicted RBP5.34□□□□□ -1.55
TSR1-203ENST00000575049 DECR2Q9NUI1 292 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 CHORDC1Q9UHD1 332 aaPredicted RBP5.34□□□□□ -1.55
TSR1-203ENST00000575049 LYVE1Q9Y5Y7 322 aa5.34□□□□□ -1.55
TSR1-203ENST00000575049 CC2D2AQ9P2K1 1620 aa5.34□□□□□ -1.56
TSR1-203ENST00000575049 ABCA10Q8WWZ4 1543 aa5.33□□□□□ -1.56
TSR1-203ENST00000575049 BRD4O60885 1362 aaPredicted RBP5.33□□□□□ -1.56
TSR1-203ENST00000575049 SYNRGQ9UMZ2 1314 aa5.33□□□□□ -1.56
TSR1-203ENST00000575049 PMS2P1A4D2B8 440 aa5.33□□□□□ -1.56
TSR1-203ENST00000575049 PRSS29PA6NIE9 313 aa5.33□□□□□ -1.56
TSR1-203ENST00000575049 STX16-NPEPL1H3BU86 382 aa5.33□□□□□ -1.56
TSR1-203ENST00000575049 STX16O14662 325 aa5.33□□□□□ -1.56
TSR1-203ENST00000575049 KLK10O43240 276 aa5.33□□□□□ -1.56
TSR1-203ENST00000575049 SRGAP2O75044 1071 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms