RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 KRT83P78385 493 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 CDK17Q00537 523 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 IFRD2Q12894 506 aaPredicted RBP11.15□□□□□ -0.62
LITAF-216ENST00000574848 NR1H3Q13133 447 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 HECTD3Q5T447 861 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 NAIF1Q69YI7 327 aaPredicted RBP11.15□□□□□ -0.62
LITAF-216ENST00000574848 PKN3Q6P5Z2 889 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 GPRIN1Q7Z2K8 1008 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 CACNA2D4Q7Z3S7 1137 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 LONP2Q86WA8 852 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 FMNL3Q8IVF7 1028 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 CCDC170Q8IYT3 715 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 CD101Q93033 1021 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 OTUB2Q96DC9 234 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 CYFIP2Q96F07 1278 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 DNAI2Q9GZS0 605 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 MMRN2Q9H8L6 949 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 FBRSL1Q9HCM7 1045 aaKnown RBP11.15□□□□□ -0.62
LITAF-216ENST00000574848 CYLDQ9NQC7 956 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 C2orf42Q9NWW7 574 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 GMIPQ9P107 970 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 SCML2Q9UQR0 700 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 DAAM1Q9Y4D1 1078 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 WDR87Q6ZQQ6 2873 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 PTPRZ1P23471 2315 aaPredicted RBP11.15□□□□□ -0.62
LITAF-216ENST00000574848 DCHS1Q96JQ0 3298 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 TLR5O60602 858 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 ATG13O75143 517 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 RNF40O75150 1001 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 AFPP02771 609 aaKnown RBP11.14□□□□□ -0.63
LITAF-216ENST00000574848 MBL2P11226 248 aaPredicted RBP11.14□□□□□ -0.63
LITAF-216ENST00000574848 CHRM1P11229 460 aaPredicted RBP11.14□□□□□ -0.63
LITAF-216ENST00000574848 CD58P19256 250 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 ADORA2BP29275 332 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 GALK1P51570 392 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 GOLGA8FQ08AF8 430 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 DMWDQ09019 674 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 GOLGA8DPQ0D2H9 430 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 DCAF17Q5H9S7 520 aaPredicted RBP11.14□□□□□ -0.63
LITAF-216ENST00000574848 ARHGAP17Q68EM7 881 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 KLHDC10Q6PID8 442 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 WDR5BQ86VZ2 330 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 ADGRG2Q8IZP9 1017 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 ZNF276Q8N554 614 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 UBR7Q8N806 425 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 SLC4A11Q8NBS3 891 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 CCDC26Q8TAB7 109 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 ARID3AQ99856 593 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 DUSP16Q9BY84 665 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 TTYH3Q9C0H2 523 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 LINC00597Q9H2U6 94 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 CCSER2Q9H7U1 834 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.14□□□□□ -0.63
LITAF-216ENST00000574848 TLR8Q9NR97 1041 aaKnown RBP11.14□□□□□ -0.63
LITAF-216ENST00000574848 CISHQ9NSE2 258 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 SMPD4Q9NXE4 827 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 CFAP97Q9P2B7 532 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 TBC1D14Q9P2M4 693 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 USP3Q9Y6I4 520 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 EML5Q05BV3 1969 aa11.14□□□□□ -0.63
LITAF-216ENST00000574848 SOWAHDA6NJG2 315 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 CYP26A1O43174 497 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 HOXC11O43248 304 aaPredicted RBP11.13□□□□□ -0.63
LITAF-216ENST00000574848 GREM1O60565 184 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 ADH1CP00326 375 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 ABL1P00519 1130 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 PGFP49763 221 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 KIF11P52732 1056 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 RAD23BP54727 409 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 ETF1P62495 437 aaKnown RBP11.13□□□□□ -0.63
LITAF-216ENST00000574848 CUL2Q13617 745 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 DHCR24Q15392 516 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 MEA1Q16626 185 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 PPP1R26Q5T8A7 1209 aaPredicted RBP11.13□□□□□ -0.63
LITAF-216ENST00000574848 TCERG1LQ5VWI1 586 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 LAIR1Q6GTX8 287 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 SYT13Q7L8C5 426 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 MYRIPQ8NFW9 859 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 ZNF592Q92610 1267 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 ACDQ96AP0 544 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 TMEM176AQ96HP8 235 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 UBXN6Q9BZV1 441 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 LUC7LQ9NQ29 371 aaKnown RBP11.13□□□□□ -0.63
LITAF-216ENST00000574848 CHORDC1Q9UHD1 332 aaPredicted RBP11.13□□□□□ -0.63
LITAF-216ENST00000574848 SIK3Q9Y2K2 1263 aa11.13□□□□□ -0.63
LITAF-216ENST00000574848 SPTBN4Q9H254 2564 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 GTPBP10A4D1E9 387 aaKnown RBP11.12□□□□□ -0.63
LITAF-216ENST00000574848 P4HA2O15460 535 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 KIF5CO60282 957 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 ACO1P21399 889 aaKnown RBP11.12□□□□□ -0.63
LITAF-216ENST00000574848 TBXAS1P24557 533 aaPredicted RBP11.12□□□□□ -0.63
LITAF-216ENST00000574848 HNRNPH3P31942 346 aaKnown RBP11.12□□□□□ -0.63
LITAF-216ENST00000574848 FMO5P49326 533 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 FNTBP49356 437 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 PSEN1P49768 467 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 CETN1Q12798 172 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 KCNH2Q12809 1159 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 RAB41Q5JT25 222 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 RHBDF2Q6PJF5 856 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms