RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 ETFBKMTQ8IXQ9 262 aa17.32■□□□□ 0.36
TVP23B-206ENST00000574226 LMO3Q8TAP4 145 aa17.32■□□□□ 0.36
TVP23B-206ENST00000574226 IPO9Q96P70 1041 aaKnown RBP17.32■□□□□ 0.36
TVP23B-206ENST00000574226 PCDHB4Q9Y5E5 795 aa17.32■□□□□ 0.36
TVP23B-206ENST00000574226 RALGAPA1Q6GYQ0 2036 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 SCAMP3O14828 347 aaKnown RBP17.31■□□□□ 0.36
TVP23B-206ENST00000574226 ALDH1A2O94788 518 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 YWHAGP61981 247 aaKnown RBP eCLIP17.31■□□□□ 0.36
TVP23B-206ENST00000574226 E2F5Q15329 346 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 CAMK4Q16566 473 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 EOGTQ5NDL2 527 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 ERMP1Q7Z2K6 904 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 TMEM25Q86YD3 366 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 SIX6OS1Q8N1H7 587 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 DCLK2Q8N568 766 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 TSTD1Q8NFU3 115 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 ZC3H10Q96K80 434 aaKnown RBP17.31■□□□□ 0.36
TVP23B-206ENST00000574226 BBS2Q9BXC9 721 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 CNGB3Q9NQW8 809 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 MARCH2Q9P0N8 246 aa17.31■□□□□ 0.36
TVP23B-206ENST00000574226 MYO18AQ92614 2054 aaKnown RBP17.3■□□□□ 0.36
TVP23B-206ENST00000574226 TBC1D3BA6NDS4 549 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 CACNG3O60359 315 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 TULP3O75386 442 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 STC2O76061 302 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 SLC6A11P48066 632 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 MEA1Q16626 185 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 PKDCCQ504Y2 493 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 Q6ZNB5 142 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 CLEC17AQ6ZS10 378 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 MIB1Q86YT6 1006 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 PHTF2Q8N3S3 785 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 ABCC13Q9NSE7 274 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 DACH1Q9UI36 760 aa17.3■□□□□ 0.36
TVP23B-206ENST00000574226 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.3■□□□□ 0.36
TVP23B-206ENST00000574226 KIR2DL1P43626 348 aaPredicted RBP17.29■□□□□ 0.36
TVP23B-206ENST00000574226 SEC13P55735 322 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 ZNF445P59923 1031 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 EFEMP1Q12805 493 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 PUM1Q14671 1186 aaKnown RBP eCLIP17.29■□□□□ 0.36
TVP23B-206ENST00000574226 CRY1Q16526 586 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 USP39Q53GS9 565 aaKnown RBP17.29■□□□□ 0.36
TVP23B-206ENST00000574226 GRAMD4Q6IC98 578 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 C12orf40Q86WS4 652 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 FAM114A1Q8IWE2 563 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 TERB1Q8NA31 727 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 RBBP8NLQ8NC74 664 aaPredicted RBP17.29■□□□□ 0.36
TVP23B-206ENST00000574226 RNF139Q8WU17 664 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 IRGQQ8WZA9 623 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 PLD4Q96BZ4 506 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
TVP23B-206ENST00000574226 HSFY1Q96LI6 401 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 HHIPQ96QV1 700 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 ULBP1Q9BZM6 244 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 CLSTN2Q9H4D0 955 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 POLMQ9NP87 494 aaPredicted RBP17.29■□□□□ 0.36
TVP23B-206ENST00000574226 RASAL2Q9UJF2 1139 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 NUDT5Q9UKK9 219 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 USP18Q9UMW8 372 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 CNTN6Q9UQ52 1028 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 STARD13Q9Y3M8 1113 aa17.29■□□□□ 0.36
TVP23B-206ENST00000574226 HBS1LQ9Y450 684 aaKnown RBP17.29■□□□□ 0.36
TVP23B-206ENST00000574226 GTPBP10A4D1E9 387 aaKnown RBP17.28■□□□□ 0.36
TVP23B-206ENST00000574226 NEDD8-MDP1E9PL57 170 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 SART1O43290 800 aaKnown RBP17.28■□□□□ 0.36
TVP23B-206ENST00000574226 FBXO21O94952 628 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 TYRP14679 529 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 ZNF132P52740 706 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 MFAP3P55082 362 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 KDSRQ06136 332 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 ADIGQ0VDE8 80 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 BYSLQ13895 437 aaKnown RBP17.28■□□□□ 0.36
TVP23B-206ENST00000574226 ELF2Q15723 593 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 CSRP2Q16527 193 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 LPAL2Q16609 132 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 TPD52L1Q16890 204 aaPredicted RBP17.28■□□□□ 0.36
TVP23B-206ENST00000574226 CT47A1Q5JQC4 288 aaPredicted RBP17.28■□□□□ 0.36
TVP23B-206ENST00000574226 RASSF3Q86WH2 238 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 FAM160A2Q8N612 972 aaPredicted RBP17.28■□□□□ 0.36
TVP23B-206ENST00000574226 NAT16Q8N8M0 369 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 IL17RCQ8NAC3 791 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 SLC35F5Q8WV83 523 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 GOLGA1Q92805 767 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 WBP2Q969T9 261 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 INTS2Q9H0H0 1204 aaKnown RBP17.28■□□□□ 0.36
TVP23B-206ENST00000574226 DNAJC17Q9NVM6 304 aaKnown RBP17.28■□□□□ 0.36
TVP23B-206ENST00000574226 PCDHGA5Q9Y5G8 931 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 CACNA1AO00555 2505 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 EML5Q05BV3 1969 aa17.28■□□□□ 0.36
TVP23B-206ENST00000574226 MDM4O15151 490 aa17.27■□□□□ 0.36
TVP23B-206ENST00000574226 MED7O43513 233 aa17.27■□□□□ 0.36
TVP23B-206ENST00000574226 RHOBTB1O94844 696 aa17.27■□□□□ 0.36
TVP23B-206ENST00000574226 KLF8O95600 359 aaPredicted RBP17.27■□□□□ 0.36
TVP23B-206ENST00000574226 LATS1O95835 1130 aa17.27■□□□□ 0.36
TVP23B-206ENST00000574226 CYBBP04839 570 aa17.27■□□□□ 0.36
TVP23B-206ENST00000574226 TGM1P22735 817 aa17.27■□□□□ 0.36
TVP23B-206ENST00000574226 ERCC5P28715 1186 aaPredicted RBP17.27■□□□□ 0.36
TVP23B-206ENST00000574226 TIE1P35590 1138 aa17.27■□□□□ 0.36
TVP23B-206ENST00000574226 PXNP49023 591 aaPredicted RBP17.27■□□□□ 0.36
TVP23B-206ENST00000574226 HARS2P49590 506 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms