RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 USP3Q9Y6I4 520 aa15.12■□□□□ 0.01
ABR-223ENST00000573895 PTPRZ1P23471 2315 aaPredicted RBP15.11■□□□□ 0.01
ABR-223ENST00000573895 OTOL1A6NHN0 477 aaPredicted RBP15.11■□□□□ 0.01
ABR-223ENST00000573895 COCHO43405 550 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 NFATC1O95644 943 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 SERPING1P05155 500 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 SP9P0CG40 484 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 ACO1P21399 889 aaKnown RBP15.11■□□□□ 0.01
ABR-223ENST00000573895 KIF11P52732 1056 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 SLC8A3P57103 927 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 MTAPQ13126 283 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 PPP2R5DQ14738 602 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 ASIC2Q16515 512 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 TMEM196Q5HYL7 178 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 KLHDC10Q6PID8 442 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 ALYREFQ86V81 257 aaKnown RBP15.11■□□□□ 0.01
ABR-223ENST00000573895 ANKRD52Q8NB46 1076 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 KAT5Q92993 513 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 TRIM44Q96DX7 344 aaPredicted RBP15.11■□□□□ 0.01
ABR-223ENST00000573895 BAG1Q99933 345 aaPredicted RBP15.11■□□□□ 0.01
ABR-223ENST00000573895 FAM126AQ9BYI3 521 aaPredicted RBP15.11■□□□□ 0.01
ABR-223ENST00000573895 CYLDQ9NQC7 956 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 GMIPQ9P107 970 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 TBC1D14Q9P2M4 693 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 AJAP1Q9UKB5 411 aaPredicted RBP15.11■□□□□ 0.01
ABR-223ENST00000573895 MYOFQ9NZM1 2061 aa15.11■□□□□ 0.01
ABR-223ENST00000573895 E2F8A0AVK6 867 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 PAEPP09466 180 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 MBL2P11226 248 aaPredicted RBP15.1■□□□□ 0.01
ABR-223ENST00000573895 VDRP11473 427 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 ARSAP15289 507 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 GJA4P35212 333 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 USP8P40818 1118 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 PRKCIP41743 596 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 CCR3P51677 355 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 PTK2Q05397 1052 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 PON2Q15165 354 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 SGO2Q562F6 1265 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 GPRIN1Q7Z2K8 1008 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
ABR-223ENST00000573895 SPEM1Q8N4L4 309 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 TTC8Q8TAM2 541 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 NELL1Q92832 810 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 OTUB2Q96DC9 234 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 CHFRQ96EP1 664 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 ZFRQ96KR1 1074 aaKnown RBP15.1■□□□□ 0.01
ABR-223ENST00000573895 CCSER2Q9H7U1 834 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 PCDHB4Q9Y5E5 795 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 WNT6Q9Y6F9 365 aa15.1■□□□□ 0.01
ABR-223ENST00000573895 ATG2BQ96BY7 2078 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 SSU72P8A0A1W2PR75 194 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 TLR5O60602 858 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 GFPT2O94808 682 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 PAPSS2O95340 614 aaPredicted RBP15.09■□□□□ 0.01
ABR-223ENST00000573895 KRT5P13647 590 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 DRD1P21728 446 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 GOLGA8FQ08AF8 430 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 GOLGA8DPQ0D2H9 430 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 KLHL30Q0D2K2 578 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 GRSF1Q12849 480 aaKnown RBP eCLIP15.09■□□□□ 0.01
ABR-223ENST00000573895 RAB41Q5JT25 222 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 WDR59Q6PJI9 974 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 TADA2BQ86TJ2 420 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 CCDC170Q8IYT3 715 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 ADGRG2Q8IZP9 1017 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 CDK5RAP1Q96SZ6 601 aaKnown RBP15.09■□□□□ 0.01
ABR-223ENST00000573895 LINC00597Q9H2U6 94 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 CLIC5Q9NZA1 410 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 PCDHGA2Q9Y5H1 932 aa15.09■□□□□ 0.01
ABR-223ENST00000573895 EP300Q09472 2414 aaPredicted RBP15.08■□□□□ 0.01
ABR-223ENST00000573895 XPO1O14980 1071 aaKnown RBP15.08■□□□□ 0
ABR-223ENST00000573895 CYP26A1O43174 497 aa15.08■□□□□ 0
ABR-223ENST00000573895 SKILP12757 684 aa15.08■□□□□ 0
ABR-223ENST00000573895 CLCN1P35523 988 aa15.08■□□□□ 0
ABR-223ENST00000573895 ATP5C1P36542 298 aaKnown RBP15.08■□□□□ 0
ABR-223ENST00000573895 BCAT1P54687 386 aa15.08■□□□□ 0
ABR-223ENST00000573895 NRLP54845 237 aa15.08■□□□□ 0
ABR-223ENST00000573895 ARID5AQ03989 594 aa15.08■□□□□ 0
ABR-223ENST00000573895 CSTF1Q05048 431 aaKnown RBP15.08■□□□□ 0
ABR-223ENST00000573895 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
ABR-223ENST00000573895 STILQ15468 1287 aa15.08■□□□□ 0
ABR-223ENST00000573895 FBXO43Q4G163 708 aa15.08■□□□□ 0
ABR-223ENST00000573895 TMEM270Q6UE05 265 aa15.08■□□□□ 0
ABR-223ENST00000573895 VPS36Q86VN1 386 aa15.08■□□□□ 0
ABR-223ENST00000573895 ARHGAP18Q8N392 663 aa15.08■□□□□ 0
ABR-223ENST00000573895 ZBTB44Q8NCP5 570 aa15.08■□□□□ 0
ABR-223ENST00000573895 CCDC26Q8TAB7 109 aa15.08■□□□□ 0
ABR-223ENST00000573895 NKD2Q969F2 451 aaPredicted RBP15.08■□□□□ 0
ABR-223ENST00000573895 CCDC42Q96M95 316 aa15.08■□□□□ 0
ABR-223ENST00000573895 P2RY13Q9BPV8 354 aa15.08■□□□□ 0
ABR-223ENST00000573895 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.08■□□□□ 0
ABR-223ENST00000573895 ZSCAN32Q9NX65 697 aa15.08■□□□□ 0
ABR-223ENST00000573895 SMPD4Q9NXE4 827 aa15.08■□□□□ 0
ABR-223ENST00000573895 CFAP97Q9P2B7 532 aa15.08■□□□□ 0
ABR-223ENST00000573895 HESX1Q9UBX0 185 aa15.08■□□□□ 0
ABR-223ENST00000573895 TSPAN16Q9UKR8 245 aa15.08■□□□□ 0
ABR-223ENST00000573895 GVINP1Q7Z2Y8 2422 aa15.08■□□□□ 0
ABR-223ENST00000573895 CFAP54Q96N23 3096 aa15.08■□□□□ 0
ABR-223ENST00000573895 O00370 1275 aa15.07■□□□□ 0
ABR-223ENST00000573895 ARHGAP6O43182 974 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms