RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 SERTAD1Q9UHV2 236 aa8.62□□□□□ -1.03
NPLOC4-211ENST00000573212 ASCC3Q8N3C0 2202 aaKnown RBP8.62□□□□□ -1.03
NPLOC4-211ENST00000573212 PTPRJQ12913 1337 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 ATXN2Q99700 1313 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 FAM92AA1XBS5 289 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TBC1D3BA6NDS4 549 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TRIM24O15164 1050 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 HOXC11O43248 304 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 SH3BP5O60239 455 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TULP3O75386 442 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 ADH1CP00326 375 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 CFIP05156 583 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 SYPP08247 313 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TMEM191BP0C7N4 346 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 ZDHHC11BP0C7U3 371 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 PTPN1P18031 435 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 ANXA13P27216 316 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 GJB2P29033 226 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 NTSR1P30989 418 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 GNL1P36915 607 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 ATXN3P54252 364 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 CYP27A1Q02318 531 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 RPL6Q02878 288 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 MYO1EQ12965 1108 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 ALCAMQ13740 583 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TRIP6Q15654 476 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 DUOXA2Q1HG44 320 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 DBX2Q6ZNG2 339 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TRAPPC11Q7Z392 1133 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 RABEPKQ7Z6M1 372 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 DDX42Q86XP3 938 aaKnown RBP eCLIP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TMEM25Q86YD3 366 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 NUP93Q8N1F7 819 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 PGBD3Q8N328 593 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 GPD1LQ8N335 351 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 DEFB119Q8N690 84 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 NAT16Q8N8M0 369 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 OR2I1PQ8NGU4 316 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 OVCA2Q8WZ82 227 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 ANKRD36BP1Q96IX9 119 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 CAMK1GQ96NX5 476 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 GTPBP2Q9BX10 602 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 PCIF1Q9H4Z3 704 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 CYLDQ9NQC7 956 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 SPHK2Q9NRA0 654 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TMPRSS4Q9NRS4 437 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 SMPD4Q9NXE4 827 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 TBC1D7Q9P0N9 293 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 CALCOCO1Q9P1Z2 691 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 STIM2Q9P246 746 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 DEC1Q9P2X7 70 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 CHORDC1Q9UHD1 332 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 NUP205Q92621 2012 aa8.61□□□□□ -1.03
NPLOC4-211ENST00000573212 DMXL2Q8TDJ6 3036 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 OBSL1O75147 1896 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 KIAA1549LQ6ZVL6 1849 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 ZNF233A6NK53 670 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 H3BQV1 296 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 KIAA0391O15091 583 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 ZBTB24O43167 697 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 COCHO43405 550 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 GREM1O60565 184 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 LILRA1O75019 489 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 CBFA2T3O75081 653 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 ZNF217O75362 1048 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 PRPF6O94906 941 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 GCNT3O95395 438 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 YWHAQP27348 245 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 KDSRQ06136 332 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 DHX9Q08211 1270 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 EHHADHQ08426 723 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 SURF1Q15526 300 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 PREPLQ4J6C6 727 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 MDH1BQ5I0G3 518 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 C19orf48Q6RUI8 117 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 PAQR9Q6ZVX9 377 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 HTR3DQ70Z44 454 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 SV2BQ7L1I2 683 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 TRMT11Q7Z4G4 463 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 GLRX5Q86SX6 157 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 SLCO6A1Q86UG4 719 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 PDZD3Q86UT5 571 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 BBS7Q8IWZ6 715 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 ZNF513Q8N8E2 541 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 TERB1Q8NA31 727 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 IPO4Q8TEX9 1081 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 ALKBH8Q96BT7 664 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 MYO19Q96H55 970 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 TMX3Q96JJ7 454 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 SLITRK1Q96PX8 696 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 ACOX2Q99424 681 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 GABRG3Q99928 467 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 B3GNT5Q9BYG0 378 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 STK17AQ9UEE5 414 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 SRPRBQ9Y5M8 271 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 THADAQ6YHU6 1953 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 CACNA1EQ15878 2313 aa8.6□□□□□ -1.03
NPLOC4-211ENST00000573212 PTPRDP23468 1912 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms