RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 HINFPQ9BQA5 517 aa18.18■□□□□ 0.5
SMG6-212ENST00000573153 SRRTQ9BXP5 876 aaKnown RBP18.18■□□□□ 0.5
SMG6-212ENST00000573153 ARHGEF4Q9NR80 690 aa18.18■□□□□ 0.5
SMG6-212ENST00000573153 DNMT3LQ9UJW3 386 aa18.18■□□□□ 0.5
SMG6-212ENST00000573153 FBXO10Q9UK96 956 aa18.18■□□□□ 0.5
SMG6-212ENST00000573153 SPAG17Q6Q759 2223 aa18.18■□□□□ 0.5
SMG6-212ENST00000573153 RPP40O75818 363 aaKnown RBP18.17■□□□□ 0.5
SMG6-212ENST00000573153 APBB3O95704 486 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 PAEPP09466 180 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 GRIA2P42262 883 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 GCNT1Q02742 428 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 C10orf120Q5SQS8 335 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 TMEM270Q6UE05 265 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 FAM217AQ8IXS0 508 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 SCML4Q8N228 414 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 CCDC33Q8N5R6 958 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 NAT16Q8N8M0 369 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 EHBP1Q8NDI1 1231 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 MDGA1Q8NFP4 955 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 UBA3Q8TBC4 463 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 KCTD13Q8WZ19 329 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 NT5C1BQ96P26 610 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 DUSP15Q9H1R2 295 aaPredicted RBP18.17■□□□□ 0.5
SMG6-212ENST00000573153 GMEB2Q9UKD1 530 aa18.17■□□□□ 0.5
SMG6-212ENST00000573153 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.17■□□□□ 0.5
SMG6-212ENST00000573153 YJEFN3A6XGL0 299 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 PRRT4C9JH25 899 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 E7ENQ6 273 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 DCLK1O15075 740 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 EPN2O95208 641 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 ZBED1O96006 694 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 PENKP01210 267 aaPredicted RBP18.16■□□□□ 0.5
SMG6-212ENST00000573153 AFPP02771 609 aaKnown RBP18.16■□□□□ 0.5
SMG6-212ENST00000573153 APODP05090 189 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 TNFRSF4P43489 277 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 RPL34P49207 117 aaKnown RBP18.16■□□□□ 0.5
SMG6-212ENST00000573153 YWHAGP61981 247 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMG6-212ENST00000573153 ADIGQ0VDE8 80 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 PLK5Q496M5 336 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 FYB2Q5VWT5 728 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 SMYD5Q6GMV2 418 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 PMF1Q6P1K2 205 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 TOGARAM2Q6ZUX3 1019 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 RRAGAQ7L523 313 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 TXNDC5Q8NBS9 432 aaKnown RBP18.16■□□□□ 0.5
SMG6-212ENST00000573153 CNOT6LQ96LI5 555 aaKnown RBP18.16■□□□□ 0.5
SMG6-212ENST00000573153 NACA2Q9H009 215 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 SEMA4GQ9NTN9 838 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 STARD13Q9Y3M8 1113 aa18.16■□□□□ 0.5
SMG6-212ENST00000573153 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMG6-212ENST00000573153 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.16■□□□□ 0.5
SMG6-212ENST00000573153 PLXND1Q9Y4D7 1925 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.15■□□□□ 0.5
SMG6-212ENST00000573153 LRP3O75074 770 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 TYRP14679 529 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 CD19P15391 556 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 BRD2P25440 801 aaKnown RBP18.15■□□□□ 0.5
SMG6-212ENST00000573153 TIE1P35590 1138 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 SLC8A3P57103 927 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 DAOAP59103 153 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 EFEMP1Q12805 493 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 RSPO4Q2I0M5 234 aaPredicted RBP18.15■□□□□ 0.5
SMG6-212ENST00000573153 PLA2G2CQ5R387 149 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 DPY19L2P1Q6NXN4 242 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 PPM1KQ8N3J5 372 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 GPR161Q8N6U8 529 aaKnown RBP18.15■□□□□ 0.5
SMG6-212ENST00000573153 RBBP8NLQ8NC74 664 aaPredicted RBP18.15■□□□□ 0.5
SMG6-212ENST00000573153 CDK5RAP1Q96SZ6 601 aaKnown RBP18.15■□□□□ 0.5
SMG6-212ENST00000573153 INTS2Q9H0H0 1204 aaKnown RBP18.15■□□□□ 0.5
SMG6-212ENST00000573153 RASAL2Q9UJF2 1139 aa18.15■□□□□ 0.5
SMG6-212ENST00000573153 AGO1Q9UL18 857 aaKnown RBP18.15■□□□□ 0.5
SMG6-212ENST00000573153 MYO18AQ92614 2054 aaKnown RBP18.14■□□□□ 0.5
SMG6-212ENST00000573153 A0A1W2PQF6 199 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 NEDD8-MDP1E9PL57 170 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 KLF8O95600 359 aaPredicted RBP18.14■□□□□ 0.49
SMG6-212ENST00000573153 BCKDHBP21953 392 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 APBA1Q02410 837 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 TRIP4Q15650 581 aaPredicted RBP18.14■□□□□ 0.49
SMG6-212ENST00000573153 CNGA2Q16280 664 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 CSRP2Q16527 193 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 ANO4Q32M45 955 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 HSF5Q4G112 596 aaPredicted RBP18.14■□□□□ 0.49
SMG6-212ENST00000573153 TPGS1Q6ZTW0 290 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.14■□□□□ 0.49
SMG6-212ENST00000573153 TADA2BQ86TJ2 420 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 TSTD1Q8NFU3 115 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 CCDC26Q8TAB7 109 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 CLEC4CQ8WTT0 213 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 SECISBP2LQ93073 1101 aaKnown RBP18.14■□□□□ 0.49
SMG6-212ENST00000573153 LOXL4Q96JB6 756 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 ACOX2Q99424 681 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 TPSD1Q9BZJ3 242 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 RXFP3Q9NSD7 469 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 LMBRD1Q9NUN5 540 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 DEC1Q9P2X7 70 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 AJAP1Q9UKB5 411 aaPredicted RBP18.14■□□□□ 0.49
SMG6-212ENST00000573153 RAB23Q9ULC3 237 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 CLEC4EQ9ULY5 219 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms