RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 CGNQ9P2M7 1197 aaKnown RBP12.75□□□□□ -0.37
TRIM25-207ENST00000573108 HMGXB4Q9UGU5 601 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 KLK13Q9UKR3 277 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 FREM2Q5SZK8 3169 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 IGHV1OR15-9A0A0B4J2B8 117 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 SRRM3A6NNA2 597 aaPredicted RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 PRRT4C9JH25 899 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 PDXKO00764 312 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 TLR5O60602 858 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 NDUFV2P19404 249 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 NTSR1P30989 418 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 MAP3K7CLP57077 242 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 DLG4P78352 724 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 SIM1P81133 766 aaPredicted RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 ZNF33AQ06730 810 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 NCOA4Q13772 614 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 DUOXA1Q1HG43 343 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 GRAMD4Q6IC98 578 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 TPGS1Q6ZTW0 290 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 TOGARAM2Q6ZUX3 1019 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 GPRIN1Q7Z2K8 1008 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 TRMT11Q7Z4G4 463 aaKnown RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 SLC41A1Q8IVJ1 513 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 SMYD4Q8IYR2 804 aaPredicted RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 CCDC47Q96A33 483 aaKnown RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 TNIP3Q96KP6 325 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 TIGD1Q96MW7 591 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 DUSP9Q99956 384 aaKnown RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 KLF16Q9BXK1 252 aaPredicted RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 NACA2Q9H009 215 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 SLC6A17Q9H1V8 727 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 CAPN10Q9HC96 672 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
TRIM25-207ENST00000573108 OSER1Q9NX31 292 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 SLC6A14Q9UN76 642 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 CYP8B1Q9UNU6 501 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 STARD13Q9Y3M8 1113 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 PCDHA5Q9Y5H7 936 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 RAD54BQ9Y620 910 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 ATRXP46100 2492 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 LAMA5O15230 3695 aa12.74□□□□□ -0.37
TRIM25-207ENST00000573108 TMEM8BA6NDV4 472 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 NEDD8-MDP1E9PL57 170 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 SERPINF2P08697 491 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 TYRP14679 529 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 HOXD12P35452 270 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 DPP6P42658 865 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 NDST1P52848 882 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 ATXN3P54252 364 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-207ENST00000573108 GFPT1Q06210 699 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-207ENST00000573108 PREPLQ4J6C6 727 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-207ENST00000573108 SLC36A4Q6YBV0 504 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 HTR3DQ70Z44 454 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 SLC9A9Q8IVB4 645 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 CHPFQ8IZ52 775 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 MINDY1Q8N5J2 469 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 C12orf29Q8N999 325 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 CEP76Q8TAP6 659 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 SPATA20Q8TB22 786 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 GOLGA5Q8TBA6 731 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 IPO4Q8TEX9 1081 aaKnown RBP12.73□□□□□ -0.37
TRIM25-207ENST00000573108 TMEM174Q8WUU8 243 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 ZCCHC14Q8WYQ9 949 aaKnown RBP12.73□□□□□ -0.37
TRIM25-207ENST00000573108 JAKMIP2Q96AA8 810 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 P2RY11Q96G91 374 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 HSPA12BQ96MM6 686 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 BBS2Q9BXC9 721 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 CSNK1G1Q9HCP0 422 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 FAM49BQ9NUQ9 324 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 COMMD8Q9NX08 183 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 NEUROG3Q9Y4Z2 214 aa12.73□□□□□ -0.37
TRIM25-207ENST00000573108 ANKRD11Q6UB99 2663 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-207ENST00000573108 UPK3BL1B0FP48 263 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 WASH3PC4AMC7 463 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 UPK3BL2E5RIL1 263 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 ARHGAP33O14559 1287 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 MDM4O15151 490 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 CYP26A1O43174 497 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 CACNG3O60359 315 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 OPHN1O60890 802 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 NR3C1P04150 777 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 CD59P13987 128 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 ADORA2BP29275 332 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 CLDN10P78369 228 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 SPOPLQ6IQ16 392 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 NUDT18Q6ZVK8 323 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 CRYBG2Q8N1P7 616 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 GUF1Q8N442 669 aaKnown RBP12.72□□□□□ -0.37
TRIM25-207ENST00000573108 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 CHCHD4Q8N4Q1 142 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 TRIML1Q8N9V2 468 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 BHMTQ93088 406 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 XPO6Q96QU8 1125 aaKnown RBP12.72□□□□□ -0.37
TRIM25-207ENST00000573108 TWNKQ96RR1 684 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 GABRG3Q99928 467 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 NMUR1Q9HB89 426 aa12.72□□□□□ -0.37
TRIM25-207ENST00000573108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms